iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006271

Ensembl Protein ID

scaffold_603080.1

UniProt Accession

D7M7M5; D7M7M5_ARALL

Genbank Protein ID

EFH50740.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

GL348718

Gene Name

ARALYDRAFT_911023

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
scaffold_603080.1	scaffold_603080.1	scaffold_603080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-11	44.6	200	224

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWD 29
            ++ + +d +++ sGs D  i++WD
   Q: 200  LSVTWsPDaKRIFSGSSDRLIRCWD 224
           6899********************* PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MLEYRCSSVD WKPSPVVALA NSSDDSQVAA AREDGSLEIW LVSPGAVGWH CQLTIHGDPN 60
SRISSLAWCC SGSKGLPSGR LFSSSIDGSI SEWDLFDLKQ KIVLESIGFS IWQMALAPIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACTTCTCCT TCTTCTCCGT CATGCTCGAA TACCGTTGCA GCTCCGTTGA CTGGAAACCA 60
TCACCGGTGG TAGCCCTAGC TAACAGCTCC GACGACTCAC AAGTCGCGGC GGCTCGCGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0009793--P:embryo development ending in seed dormancy
GO:0010311--P:lateral root formation
GO:0048366--P:leaf development
GO:0010305--P:leaf vascular tissue pattern formation
GO:0010073--P:meristem maintenance
GO:2000012--P:regulation of auxin polar transport
GO:0010449--P:root meristem growth

KEGG

aly:ARALYDRAFT_911023

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001161	Aegilops tauschii	48.34	0.00e+00	704.00
IUUC-Aml-001310	Ailuropoda melanoleuca	24.02	2.00e-47	182.00
IUUC-Atr-003076	Amborella trichopoda	53.34	0.00e+00	782.00
IUUC-Apl-003367	Anas platyrhynchos	31.93	7.00e-15	72.80
IUUC-Aca-004429	Anolis carolinensis	26.84	8.00e-25	107.00
IUUC-Ath-007331	Arabidopsis thaliana	93.38	0.00e+00	1436.00
IUUC-Ago-007843	Ashbya gossypii	22.66	3.00e-23	103.00
IUUC-Acl-008229	Aspergillus clavatus	27.91	1.00e-29	124.00
IUUC-Afl-008438	Aspergillus flavus	27.42	2.00e-27	117.00
IUUC-Afu-008910	Aspergillus fumigatus	27.10	9.00e-29	121.00
IUUC-Ani-009321	Aspergillus nidulans	28.07	7.00e-31	128.00
IUUC-Ang-009592	Aspergillus niger	25.61	2.00e-25	110.00
IUUC-Aor-010220	Aspergillus oryzae	27.42	2.00e-27	117.00
IUUC-Ate-010317	Aspergillus terreus	27.30	9.00e-29	121.00
IUUC-Ame-010957	Astyanax mexicanus	23.95	1.00e-43	171.00
IUUC-Bgr-012057	Blumeria graminis	28.69	4.00e-31	129.00
IUUC-Bta-012473	Bos taurus	24.00	6.00e-46	178.00
IUUC-Bdi-014203	Brachypodium distachyon	52.34	0.00e+00	796.00
IUUC-Bol-016163	Brassica oleracea	86.72	0.00e+00	1394.00
IUUC-Bra-017482	Brassica rapa	86.47	0.00e+00	1399.00
IUUC-Cja-019942	Callithrix jacchus	23.55	4.00e-47	182.00
IUUC-Cfa-020549	Canis familiaris	25.47	3.00e-37	148.00
IUUC-Cpo-022088	Cavia porcellus	24.85	2.00e-44	173.00
IUUC-Csa-023773	Chlorocebus sabaeus	23.91	4.00e-48	186.00
IUUC-Cho-024302	Choloepus hoffmanni	24.67	5.00e-38	152.00
IUUC-Cin-025384	Ciona intestinalis	24.74	3.00e-44	172.00
IUUC-Dre-027460	Danio rerio	25.71	2.00e-31	129.00
IUUC-Dno-029594	Dasypus novemcinctus	24.03	3.00e-45	176.00
IUUC-Dor-030564	Dipodomys ordii	22.89	2.00e-14	73.90
IUUC-Dse-031179	Dothistroma septosporum	21.97	5.00e-24	105.00
IUUC-Dme-031603	Drosophila melanogaster	23.17	8.00e-19	88.20
IUUC-Ete-032655	Echinops telfairi	23.82	3.00e-32	132.00
IUUC-Eca-033838	Equus caballus	24.04	7.00e-47	181.00
IUUC-Eeu-034548	Erinaceus europaeus	22.96	1.00e-40	160.00
IUUC-Fca-035715	Felis catus	24.41	1.00e-48	187.00
IUUC-Fal-037394	Ficedula albicollis	24.62	8.00e-35	141.00
IUUC-Gmo-039235	Gadus morhua	22.78	6.00e-45	174.00
IUUC-Ggr-040043	Gaeumannomyces graminis	27.10	5.00e-27	115.00
IUUC-Gga-041172	Gallus gallus	24.72	2.00e-46	179.00
IUUC-Gac-042466	Gasterosteus aculeatus	24.22	2.00e-45	176.00
IUUC-Gma-044129	Glycine max	56.73	0.00e+00	895.00
IUUC-Ggo-045416	Gorilla gorilla	24.54	1.00e-34	140.00
IUUC-Hsa-046115	Homo sapiens	24.10	1.00e-46	181.00
IUUC-Hvu-047229	Hordeum vulgare	53.12	0.00e+00	661.00
IUUC-Itr-048015	Ictidomys tridecemlineatus	23.70	5.00e-47	181.00
IUUC-Kpa-049370	Komagataella pastoris	30.48	1.00e-13	71.20
IUUC-Lch-050153	Latimeria chalumnae	25.89	8.00e-44	171.00
IUUC-Lpe-051220	Leersia perrieri	52.10	0.00e+00	769.00
IUUC-Loc-052617	Lepisosteus oculatus	23.61	2.00e-45	176.00
IUUC-Laf-053613	Loxodonta africana	23.70	7.00e-45	174.00
IUUC-Mcc-055707	Macaca mulatta	23.98	9.00e-47	181.00
IUUC-Meu-056800	Macropus eugenii	23.50	2.00e-16	80.10
IUUC-Mor-057245	Magnaporthe oryzae	26.95	9.00e-26	111.00
IUUC-Mpo-057446	Magnaporthe poae	28.18	4.00e-28	119.00
IUUC-Mtr-058393	Medicago truncatula	51.94	0.00e+00	779.00
IUUC-Mga-060018	Meleagris gallopavo	24.85	1.00e-39	157.00
IUUC-Mmr-061115	Microcebus murinus	25.15	3.00e-45	176.00
IUUC-Mdo-062235	Monodelphis domestica	24.82	7.00e-50	191.00
IUUC-Mmu-063158	Mus musculus	23.82	9.00e-46	177.00
IUUC-Mac-065380	Musa acuminata	56.92	0.00e+00	914.00
IUUC-Mpu-065805	Mustela putorius furo	24.26	7.00e-48	184.00
IUUC-Mlu-066951	Myotis lucifugus	24.20	7.00e-48	184.00
IUUC-Nfi-068295	Neosartorya fischeri	27.37	3.00e-29	123.00
IUUC-Ncr-068880	Neurospora crassa	25.53	1.00e-19	91.70
IUUC-Nle-069657	Nomascus leucogenys	24.02	2.00e-48	186.00
IUUC-Opr-070250	Ochotona princeps	22.57	6.00e-42	164.00
IUUC-Ont-072642	Oreochromis niloticus	23.93	5.00e-41	162.00
IUUC-Ocu-074741	Oryctolagus cuniculus	23.40	3.00e-42	166.00
IUUC-Oba-074974	Oryza barthii	51.17	0.00e+00	786.00
IUUC-Obr-076586	Oryza brachyantha	54.86	0.00e+00	679.00
IUUC-Ogl-077782	Oryza glaberrima	52.34	0.00e+00	798.00
IUUC-Ogu-078333	Oryza glumaepatula	49.32	0.00e+00	769.00
IUUC-Oin-079852	Oryza indica	52.46	0.00e+00	799.00
IUUC-Olo-080370	Oryza longistaminata	53.28	0.00e+00	636.00
IUUC-Ome-081442	Oryza meridionalis	51.43	0.00e+00	781.00
IUUC-Oni-082341	Oryza nivara	49.10	0.00e+00	766.00
IUUC-Opu-083824	Oryza punctata	51.93	0.00e+00	769.00
IUUC-Oru-084827	Oryza rufipogon	50.94	0.00e+00	782.00
IUUC-Osa-085742	Oryza sativa	52.22	0.00e+00	793.00
IUUC-Ola-086466	Oryzias latipes	25.82	8.00e-44	171.00
IUUC-Olu-087761	Ostreococcus lucimarinus	26.58	4.00e-61	229.00
IUUC-Oga-088721	Otolemur garnettii	24.67	1.00e-38	154.00
IUUC-Oar-089532	Ovis aries	23.79	2.00e-46	180.00
IUUC-Ptr-091604	Pan troglodytes	24.02	2.00e-48	186.00
IUUC-Pan-092060	Papio anubis	26.44	2.00e-30	125.00
IUUC-Psi-093070	Pelodiscus sinensis	24.16	8.00e-42	164.00
IUUC-Pma-094201	Petromyzon marinus	23.92	3.00e-33	135.00
IUUC-Pno-094924	Phaeosphaeria nodorum	25.79	9.00e-12	64.70
IUUC-Ppa-095599	Physcomitrella patens	42.41	2.00e-99	356.00
IUUC-Pfo-097207	Poecilia formosa	26.67	9.00e-47	181.00
IUUC-Pab-097746	Pongo abelii	23.79	5.00e-48	185.00
IUUC-Pop-099991	Populus trichocarpa	64.78	0.00e+00	1062.00
IUUC-Pca-100562	Procavia capensis	25.64	1.00e-33	137.00
IUUC-Ppe-101747	Prunus persica	66.55	0.00e+00	1033.00
IUUC-Pva-103054	Pteropus vampyrus	24.41	5.00e-48	185.00
IUUC-Pte-104064	Pyrenophora teres	26.29	8.00e-23	102.00
IUUC-Pyt-104595	Pyrenophora triticirepentis	26.02	1.00e-22	101.00
IUUC-Rno-105155	Rattus norvegicus	23.46	6.00e-46	178.00
IUUC-Sce-106369	Saccharomyces cerevisiae	23.59	4.00e-26	112.00
IUUC-Sha-107149	Sarcophilus harrisii	24.25	3.00e-48	185.00
IUUC-Sja-107777	Schizosaccharomyces japonicus	24.13	4.00e-50	192.00
IUUC-Spo-108372	Schizosaccharomyces pombe	23.44	2.00e-44	173.00
IUUC-Ssl-108650	Sclerotinia sclerotiorum	24.93	1.00e-26	114.00
IUUC-Smo-108851	Selaginella moellendorffii	40.58	1.00e-160	559.00
IUUC-Sit-110454	Setaria italica	53.72	0.00e+00	808.00
IUUC-Sly-111020	Solanum lycopersicum	60.94	0.00e+00	932.00
IUUC-Stu-112275	Solanum tuberosum	60.48	0.00e+00	912.00
IUUC-Sar-113254	Sorex araneus	26.79	2.00e-14	73.90
IUUC-Sbi-114624	Sorghum bicolor	54.49	0.00e+00	679.00
IUUC-Tgu-117407	Taeniopygia guttata	26.45	7.00e-20	90.90
IUUC-Tru-118733	Takifugu rubripes	22.71	4.00e-36	145.00
IUUC-Tsy-119213	Tarsius syrichta	29.04	3.00e-26	112.00
IUUC-Tni-120894	Tetraodon nigroviridis	29.43	2.00e-31	128.00
IUUC-Tca-121606	Theobroma cacao	61.52	0.00e+00	994.00
IUUC-Tre-121958	Trichoderma reesei	27.60	7.00e-26	112.00
IUUC-Tvi-122290	Trichoderma virens	23.74	6.00e-24	105.00
IUUC-Tae-125441	Triticum aestivum	50.12	0.00e+00	786.00
IUUC-Tme-126995	Tuber melanosporum	26.58	3.00e-25	110.00
IUUC-Ttr-128720	Tursiops truncatus	23.67	1.00e-47	184.00
IUUC-Vpa-130412	Vicugna pacos	26.87	2.00e-24	106.00
IUUC-Vvi-131256	Vitis vinifera	62.59	0.00e+00	989.00
IUUC-Xtr-131828	Xenopus tropicalis	22.69	3.00e-38	152.00
IUUC-Xma-133394	Xiphophorus maculatus	26.96	3.00e-49	189.00
IUUC-Yli-134565	Yarrowia lipolytica	24.33	4.00e-28	119.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence