iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-015063

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100829527; BRADI_1g60960

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G60960	BRADI1G60960.1	BRADI1G60960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-09	36.5	188	220

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d + l++G+ D t+++WD+r
   Q: 188  GHLDYSFSSAWhPDgRVLATGNQDRTCRLWDVR 220
           89999*******99999**************97 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MNSLLQLRNL LWATSKHDVY VMQNYSVMHW SSLLRRGKEV LNVAGQVAPT QDVRGARPLS 60
RVQISTMAVK DNLVAAGGFH GELICKHVDQ PGVAFCTNLT GNKNSITNAV DIYRSPNGAT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCCCTGCT CTGCTTCCAC AGCCACGCAA TCTCTTGGTT CGGGTTCTTC TGAATTTTCG 60
TCTTTTGGTT GCTCGATTCG GGTCTTCTCC AAACTCCGAG TCTGCCCGGC CGTGGGGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	75.71	8.00e-140	489.00
IUUC-Cme-027214	Cyanidioschyzon merolae	39.68	1.00e-53	204.00
IUUC-Hvu-047809	Hordeum vulgare	85.80	2.00e-162	564.00
IUUC-Lpe-051582	Leersia perrieri	80.76	2.00e-157	548.00
IUUC-Obr-076093	Oryza brachyantha	80.31	3.00e-155	540.00
IUUC-Ogu-078133	Oryza glumaepatula	81.42	5.00e-152	530.00
IUUC-Oin-079185	Oryza indica	76.47	1.00e-150	525.00
IUUC-Olo-080479	Oryza longistaminata	76.10	5.00e-122	430.00
IUUC-Oni-082850	Oryza nivara	81.11	2.00e-151	527.00
IUUC-Pop-099735	Populus trichocarpa	71.02	6.00e-132	462.00
IUUC-Sit-110668	Setaria italica	75.16	2.00e-141	494.00
IUUC-Sbi-113990	Sorghum bicolor	73.83	1.00e-144	505.00
IUUC-Tae-123702	Triticum aestivum	85.80	2.00e-162	564.00
IUUC-Tur-126710	Triticum urartu	68.31	2.00e-130	458.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence