iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076093

Ensembl Protein ID

OB03G28910.1

UniProt Accession

J3LPB5; J3LPB5_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB03G28910	OB03G28910.1	OB03G28910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-07	30.2	313	345

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d + +++G+ D t+++WD+r
   Q: 313  GHLDYSFSSAWhPDgRVVATGNQDRTCRLWDVR 345
           89999*******998999*************97 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAHDLHDDLE FVFSGDGDGG DDYYDYFEFG DRDAVDGGSA GAASHRNKQM DDTSALDYKE 60
GKDMQGIPWE RLNYSRDQYR KMRLRQYKNY ENLTMPRDGL AKECKQVERK DTFYDFHLNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTCGATCCA TTCTACCACT CCTCCAGTGA ACCCAAGCAG TAATAGTAGG CGCCGCAAAT 60
CCATTCTACA CGAGACCTGA TCGCTGCTGC TGCCTGCAGG TTCTTCCGAC AAGAGAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

obr:102706824

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	66.23	1.00e-170	591.00
IUUC-Atr-002734	Amborella trichopoda	67.26	7.00e-164	569.00
IUUC-Aly-005521	Arabidopsis lyrata	62.94	4.00e-154	536.00
IUUC-Ath-007611	Arabidopsis thaliana	64.25	3.00e-156	543.00
IUUC-Bdi-015063	Brachypodium distachyon	80.31	2.00e-152	530.00
IUUC-Bol-015183	Brassica oleracea	64.91	3.00e-156	543.00
IUUC-Bra-017403	Brassica rapa	64.16	5.00e-155	539.00
IUUC-Gma-044288	Glycine max	67.09	3.00e-162	563.00
IUUC-Hvu-047809	Hordeum vulgare	72.57	0.00e+00	656.00
IUUC-Lpe-051582	Leersia perrieri	83.71	0.00e+00	763.00
IUUC-Mtr-058564	Medicago truncatula	65.33	7.00e-159	552.00
IUUC-Mac-065012	Musa acuminata	64.68	3.00e-156	545.00
IUUC-Ogu-078133	Oryza glumaepatula	84.77	0.00e+00	743.00
IUUC-Oin-079185	Oryza indica	83.23	0.00e+00	747.00
IUUC-Olo-080479	Oryza longistaminata	80.20	0.00e+00	643.00
IUUC-Oni-082850	Oryza nivara	84.77	0.00e+00	739.00
IUUC-Smo-109252	Selaginella moellendorffii	56.82	3.00e-139	487.00
IUUC-Sit-110668	Setaria italica	70.39	1.00e-163	568.00
IUUC-Sly-111186	Solanum lycopersicum	63.64	3.00e-156	543.00
IUUC-Stu-111950	Solanum tuberosum	63.64	2.00e-156	544.00
IUUC-Sbi-114172	Sorghum bicolor	74.88	8.00e-178	615.00
IUUC-Tae-123702	Triticum aestivum	73.78	0.00e+00	669.00
IUUC-Tur-126710	Triticum urartu	60.25	6.00e-158	549.00
IUUC-Vvi-131311	Vitis vinifera	69.06	2.00e-169	587.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence