iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112727

Ensembl Protein ID

PGSC0003DMT400012566

UniProt Accession

M1A1F1; M1A1F1_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400004911	PGSC0003DMT400012566	PGSC0003DMT400012566

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	8.40e-29	100.7	64	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           evp+ f+CpIsle+M+dPv+l++G+ty+rs+I kw++ g+ tcP+t+q+l +++++Pn tl++li +w +++
   Q: 64   EVPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHFTCPTTMQELWDDSITPNSTLHQLIYSWFSQK 135
           69******************************************************************9987 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MPMYVPSRGR VEEFDVGGGG QVLDLETAVK DGILGGGGGV VVHGGAIEKK LSLRKMMEEL 60
NSIEVPSVFI CPISLEPMQD PVTLCTGQTY ERSNILKWFS LGHFTCPTTM QELWDDSITP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGGGGGTA GGGGGCTCAC ACTCAAAGAG GTAGCTGTTC ATCCCTTTTT CCCCTTTTAT 60
TCTCTCTCAT TTCTGGGTAA GGTTTCTCTT TAACTTATTT CTCTCTTTTC TTGATCTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102584974

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000254	Aegilops tauschii	56.22	3.00e-142	496.00
IUUC-Atr-002608	Amborella trichopoda	69.31	6.00e-154	536.00
IUUC-Aly-005542	Arabidopsis lyrata	64.89	7.00e-153	532.00
IUUC-Ath-007399	Arabidopsis thaliana	65.11	9.00e-156	541.00
IUUC-Bdi-014966	Brachypodium distachyon	56.89	6.00e-145	506.00
IUUC-Bol-015410	Brassica oleracea	64.44	1.00e-150	525.00
IUUC-Bra-017594	Brassica rapa	66.50	7.00e-148	515.00
IUUC-Gma-044207	Glycine max	68.00	8.00e-174	602.00
IUUC-Hvu-047172	Hordeum vulgare	57.21	4.00e-140	489.00
IUUC-Lpe-050937	Leersia perrieri	56.73	2.00e-128	451.00
IUUC-Mtr-058060	Medicago truncatula	68.07	5.00e-175	605.00
IUUC-Mac-065362	Musa acuminata	64.40	9.00e-154	535.00
IUUC-Oba-075363	Oryza barthii	52.22	1.00e-101	362.00
IUUC-Obr-076221	Oryza brachyantha	56.89	1.00e-136	478.00
IUUC-Ogl-077601	Oryza glaberrima	57.33	1.00e-122	432.00
IUUC-Ogu-078802	Oryza glumaepatula	57.11	7.00e-132	462.00
IUUC-Oin-079670	Oryza indica	57.11	2.00e-122	431.00
IUUC-Olo-080252	Oryza longistaminata	58.24	1.00e-75	275.00
IUUC-Ome-081565	Oryza meridionalis	57.11	2.00e-122	431.00
IUUC-Oni-082638	Oryza nivara	57.11	2.00e-122	431.00
IUUC-Opu-083387	Oryza punctata	56.89	6.00e-123	432.00
IUUC-Oru-084585	Oryza rufipogon	57.11	2.00e-122	431.00
IUUC-Osa-086056	Oryza sativa	57.11	2.00e-122	431.00
IUUC-Pop-098956	Populus trichocarpa	72.83	1.00e-174	604.00
IUUC-Ppe-101369	Prunus persica	78.95	0.00e+00	665.00
IUUC-Sit-109761	Setaria italica	58.00	1.00e-137	481.00
IUUC-Sly-111041	Solanum lycopersicum	90.20	0.00e+00	744.00
IUUC-Sbi-113971	Sorghum bicolor	58.22	1.00e-144	504.00
IUUC-Tca-121164	Theobroma cacao	74.83	3.00e-179	620.00
IUUC-Tae-123496	Triticum aestivum	56.22	3.00e-142	496.00
IUUC-Tur-126157	Triticum urartu	57.07	1.00e-55	208.00
IUUC-Vvi-131644	Vitis vinifera	78.55	4.00e-179	619.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence