iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121746

Ensembl Protein ID

EOX94711

UniProt Accession

A0A061DRM0; A0A061DRM0_THECC

Genbank Protein ID

EOX94711.1

Protein Name

tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; WD repeat-containing protein 4 homolog

Genbank Nucleotide ID

CM001879

Gene Name

TCM_004325

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_004325	EOX94711	EOX94711
TCM_004325	EOX94712	EOX94712

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.40e-16	58.8	218	259

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sd...tllvsGsdDgtikvWDlrtgvll 36
           gH++ v+claf   +d   ++lvsGs+D t+++WD+ +g ll
   Q: 218  GHKEFVSCLAFictPDylqGILVSGSGDSTVRMWDVISGSLL 259
           79999*******997656677**************9888776 PP

Organism

Theobroma cacao

Functional Description
(View)

Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit.

Protein Sequence
(Fasta)

MEDPPIEECE HDDINKTEQD TQMEESKQNN KDVEVAPALI AVHPTQNSVA VSVGSDLRVF 60
NVPEDCAVTL VDESGGASHN DSIRAIKYGA NGKLFVSAGD DKLVKVWSTE SWRCISTVYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGCCCACCG GTAAGCTTAA ACACCACTAA AACCCTAGAG ACCTCCGCCC TTTAGTTTCG 60
ACGGCGAGGC GCAAGCATGG AAGATCCTCC AATTGAAGAG TGTGAACACG ACGACATCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0819--tRNA processing
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR028884--Trm82
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus
GO:0036265--P:RNA (guanine-N7)-methylation
GO:0030488--P:tRNA methylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000556	Aegilops tauschii	50.72	6.00e-102	363.00
IUUC-Atr-002431	Amborella trichopoda	57.60	2.00e-38	150.00
IUUC-Apl-003975	Anas platyrhynchos	32.74	2.00e-21	95.50
IUUC-Aca-005170	Anolis carolinensis	30.45	5.00e-16	77.80
IUUC-Aly-005769	Arabidopsis lyrata	64.73	6.00e-153	533.00
IUUC-Ath-006733	Arabidopsis thaliana	62.47	4.00e-145	506.00
IUUC-Aor-010133	Aspergillus oryzae	27.57	5.00e-14	71.60
IUUC-Ame-010613	Astyanax mexicanus	31.05	3.00e-20	92.00
IUUC-Bgr-012067	Blumeria graminis	27.43	2.00e-14	72.80
IUUC-Bta-012788	Bos taurus	33.68	9.00e-21	93.60
IUUC-Bdi-014458	Brachypodium distachyon	55.71	2.00e-109	388.00
IUUC-Bol-016398	Brassica oleracea	60.61	6.00e-140	489.00
IUUC-Bra-016644	Brassica rapa	62.04	1.00e-144	506.00
IUUC-Cpo-021963	Cavia porcellus	34.20	7.00e-21	94.00
IUUC-Csa-024148	Chlorocebus sabaeus	35.26	1.00e-14	73.60
IUUC-Cne-026834	Cryptococcus neoformans	30.58	1.00e-17	84.00
IUUC-Dre-028427	Danio rerio	33.47	1.00e-23	103.00
IUUC-Dor-030522	Dipodomys ordii	26.04	1.00e-20	93.60
IUUC-Dme-032136	Drosophila melanogaster	31.08	3.00e-16	78.60
IUUC-Fca-035833	Felis catus	33.16	1.00e-19	90.10
IUUC-Fal-037497	Ficedula albicollis	34.01	6.00e-22	97.40
IUUC-Gga-040547	Gallus gallus	32.84	4.00e-20	91.70
IUUC-Gac-041761	Gasterosteus aculeatus	34.41	1.00e-21	96.30
IUUC-Gma-043722	Glycine max	64.19	4.00e-145	506.00
IUUC-Ggo-045340	Gorilla gorilla	35.26	2.00e-13	69.30
IUUC-Hsa-046403	Homo sapiens	35.15	6.00e-15	74.30
IUUC-Hvu-047643	Hordeum vulgare	54.09	4.00e-118	417.00
IUUC-Itr-048103	Ictidomys tridecemlineatus	34.21	6.00e-21	94.40
IUUC-Kpa-049283	Komagataella pastoris	31.58	5.00e-15	74.70
IUUC-Lch-050682	Latimeria chalumnae	33.33	1.00e-25	109.00
IUUC-Lpe-050712	Leersia perrieri	55.05	8.00e-124	436.00
IUUC-Loc-052599	Lepisosteus oculatus	32.70	2.00e-25	108.00
IUUC-Laf-054390	Loxodonta africana	34.67	4.00e-24	104.00
IUUC-Mcc-054747	Macaca mulatta	35.53	1.00e-14	73.20
IUUC-Mtr-058600	Medicago truncatula	63.19	7.00e-149	519.00
IUUC-Mla-059135	Melampsora laricipopulina	31.25	4.00e-21	95.50
IUUC-Mga-059876	Meleagris gallopavo	31.39	3.00e-20	92.00
IUUC-Mvi-060359	Microbotryum violaceum	32.91	3.00e-14	72.80
IUUC-Mmr-061518	Microcebus murinus	34.57	6.00e-20	90.90
IUUC-Mac-065625	Musa acuminata	56.83	4.00e-128	450.00
IUUC-Nle-069914	Nomascus leucogenys	34.03	7.00e-12	64.30
IUUC-Ont-071555	Oreochromis niloticus	33.02	2.00e-22	99.00
IUUC-Oan-072951	Ornithorhynchus anatinus	32.99	5.00e-21	94.40
IUUC-Ocu-074679	Oryctolagus cuniculus	35.94	9.00e-16	77.00
IUUC-Oba-075355	Oryza barthii	52.38	3.00e-116	411.00
IUUC-Obr-076769	Oryza brachyantha	55.48	1.00e-131	461.00
IUUC-Ogl-077168	Oryza glaberrima	56.22	2.00e-129	454.00
IUUC-Ogu-078275	Oryza glumaepatula	51.90	2.00e-114	405.00
IUUC-Oin-079207	Oryza indica	56.22	2.00e-129	454.00
IUUC-Ome-081169	Oryza meridionalis	44.36	1.00e-83	303.00
IUUC-Oni-082437	Oryza nivara	52.62	2.00e-116	412.00
IUUC-Opu-084031	Oryza punctata	55.98	3.00e-127	447.00
IUUC-Oru-084380	Oryza rufipogon	52.38	7.00e-116	410.00
IUUC-Osa-085327	Oryza sativa	56.22	3.00e-129	454.00
IUUC-Ola-086716	Oryzias latipes	32.97	1.00e-25	109.00
IUUC-Olu-087708	Ostreococcus lucimarinus	37.55	2.00e-36	145.00
IUUC-Oar-090239	Ovis aries	34.59	1.00e-20	93.20
IUUC-Ptr-090851	Pan troglodytes	34.65	1.00e-13	70.10
IUUC-Pan-092558	Papio anubis	35.26	1.00e-14	73.60
IUUC-Psi-093792	Pelodiscus sinensis	27.71	5.00e-19	87.80
IUUC-Ppa-095757	Physcomitrella patens	39.69	6.00e-75	273.00
IUUC-Pfo-096465	Poecilia formosa	28.95	3.00e-24	105.00
IUUC-Pab-097722	Pongo abelii	34.67	1.00e-14	73.20
IUUC-Pop-098979	Populus trichocarpa	70.16	1.00e-171	595.00
IUUC-Pca-100753	Procavia capensis	44.12	4.00e-15	75.10
IUUC-Ppe-101515	Prunus persica	71.23	2.00e-168	584.00
IUUC-Sja-107780	Schizosaccharomyces japonicus	26.37	9.00e-18	84.00
IUUC-Spo-108251	Schizosaccharomyces pombe	25.54	2.00e-16	79.70
IUUC-Smo-108938	Selaginella moellendorffii	41.74	1.00e-71	263.00
IUUC-Sit-110020	Setaria italica	54.55	2.00e-122	431.00
IUUC-Sly-111543	Solanum lycopersicum	60.94	2.00e-154	537.00
IUUC-Stu-111925	Solanum tuberosum	60.71	9.00e-156	542.00
IUUC-Sbi-114061	Sorghum bicolor	52.98	9.00e-121	426.00
IUUC-Tgu-117321	Taeniopygia guttata	33.86	2.00e-17	82.40
IUUC-Tru-118454	Takifugu rubripes	32.79	1.00e-25	109.00
IUUC-Tni-119894	Tetraodon nigroviridis	33.33	5.00e-24	104.00
IUUC-Tae-124459	Triticum aestivum	54.09	5.00e-119	420.00
IUUC-Tur-126254	Triticum urartu	49.61	3.00e-94	337.00
IUUC-Tbe-127683	Tupaia belangeri	46.67	2.00e-14	72.80
IUUC-Ttr-129056	Tursiops truncatus	34.74	2.00e-21	96.30
IUUC-Vvi-131428	Vitis vinifera	67.11	3.00e-176	610.00
IUUC-Xma-133605	Xiphophorus maculatus	30.18	6.00e-24	104.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence