iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016209

Ensembl Protein ID

Bo6g030670.1

UniProt Accession

A0A0D3CQG9; A0A0D3CQG9_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo6g030670	Bo6g030670.1	Bo6g030670.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.50e-26	90.3	268	298
UBD/Beta-Prp	2.70e-45	156.3	28	218

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWD 29
           gH ++v+c++f ++   + +sGs Dgti++W 
   Q: 268  GHHGPVHCVRFsPTgeSY-ASGSEDGTIRIWQ 298
           899*********554677.************7 PP

UBD/Beta-Prp

   S: 19   spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshd 115
           +pd+ +l+++s+d+   + + +t + + +++gh+++v++ ++++++   +++s D  +k+wd  tg+ +h+++ h++ v++++fs+++++l++G+  
   Q: 28   TPDGFFLISASKDSHPMLRNGETADWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFE-HKHIVRACAFSEDTKRLLTGGFE 123
           789999999999999999999*************************9**************************.*********************** PP
   S: 116  rtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
           +++rv+dl+      +  ++  g+v+++++  ++  +l s+++ + vrlWd+++gk+++tl+   +++v+s +++++g+++ + ++ +tvk+wd  +
   Q: 124  KILRVFDLNRLDAPPTEVDKSPGSVRTLTWLHSDqTILSSCTDIGGVRLWDVRSGKIMQTLET--KSPVTSAEVSQDGRYITT-ADGSTVKFWDANH 217
           **********99999878888888888888666637777777779****************75..************977655.6789******876 PP
   S: 212  g 212
            
   Q: 218  F 218
           5 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

MDKKKAAVPL VCHGHSRPVV DLFYSPITPD GFFLISASKD SHPMLRNGET ADWIGTFEGH 60
KGAVWSSCLD NNALRAASAS ADFSAKLWDA LTGDVLHSFE HKHIVRACAF SEDTKRLLTG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATAAGA AGAAGGCTGC TGTTCCACTT GTTTGCCATG GCCATTCCAG ACCTGTTGTT 60
GATTTGTTCT ATAGTCCAAT CACGCCTGAT GGGTTCTTCC TCATCAGTGC TAGTAAAGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000668	Aegilops tauschii	79.76	1.00e-153	535.00
IUUC-Aly-006421	Arabidopsis lyrata	92.11	0.00e+00	628.00
IUUC-Ath-006574	Arabidopsis thaliana	92.11	0.00e+00	629.00
IUUC-Bra-016858	Brassica rapa	97.63	0.00e+00	665.00
IUUC-Hvu-047544	Hordeum vulgare	80.65	7.00e-157	546.00
IUUC-Lpe-051246	Leersia perrieri	79.35	3.00e-157	547.00
IUUC-Mtr-058421	Medicago truncatula	81.25	2.00e-159	555.00
IUUC-Oba-075160	Oryza barthii	81.02	1.00e-157	548.00
IUUC-Ogl-077076	Oryza glaberrima	81.02	1.00e-157	548.00
IUUC-Ogu-078591	Oryza glumaepatula	81.02	1.00e-157	548.00
IUUC-Olo-080389	Oryza longistaminata	78.14	8.00e-116	409.00
IUUC-Oni-082190	Oryza nivara	80.42	7.00e-157	546.00
IUUC-Opu-084163	Oryza punctata	79.65	2.00e-158	551.00
IUUC-Oru-084730	Oryza rufipogon	81.02	1.00e-157	548.00
IUUC-Osa-086010	Oryza sativa	78.89	4.00e-159	553.00
IUUC-Ppa-095206	Physcomitrella patens	68.70	7.00e-135	473.00
IUUC-Ppe-102035	Prunus persica	81.87	7.00e-155	539.00
IUUC-Sit-110760	Setaria italica	81.93	6.00e-162	563.00
IUUC-Sbi-113932	Sorghum bicolor	82.88	2.00e-162	564.00
IUUC-Tca-121759	Theobroma cacao	79.94	5.00e-160	556.00
IUUC-Tae-123053	Triticum aestivum	80.36	6.00e-156	542.00
IUUC-Tbe-127324	Tupaia belangeri	37.42	1.00e-24	107.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence