iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099674

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_867066; POPTR_0006s19080g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s19080	POPTR_0006s19080.1	POPTR_0006s19080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-06	28.5	129	171

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  +d++++lp C H+fh +C+  w         + +CPlCr
   Q: 129  CAVCLCEFepEDQLRLLPkCSHAFHMECIDTW------LLSHSTCPLCR 171
           ********88777*******************......89999*****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNLVLLKIKE STFISPTQQP YFLSQPPPQP NLDTDGFNLN TKVSPSLLLI IIILAIIFFV 60
SGLLHLLVRF LLRPRNREYP DDLESVTALQ GQLQQLFHLH DAGVDQTFID ALPVFQYKAI 120

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Nucleotide Sequence
(Fasta)

CATTGGGGCT TGGATTTAAT ATTTTGTAGC AGCAGATGAG ACAGTTATTG GTATCATCAC 60
TTGGTTCAAG TCTGAAGCTT CAATCTTGCT GAGTCTCTCT CAGTTTTTTC ATCCAGAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s19080g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014934	Brachypodium distachyon	46.30	4.00e-63	234.00
IUUC-Olo-080854	Oryza longistaminata	69.77	1.00e-48	186.00
IUUC-Smo-109112	Selaginella moellendorffii	76.12	2.00e-28	115.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence