iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017772

Ensembl Protein ID

Bra026003.1-P

UniProt Accession

M4EB44; M4EB44_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra026003	Bra026003.1	Bra026003.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.60e-78	263.8	403	707

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfl 96
           Gl N gN+CY N+vLQ+L+ +++l  +ll+ +++++++     +++ +l+++l++ +  l   + +  s +++l+++++++ ++   +q+Da+Efl
   Q: 403  GLVNCGNSCYANAVLQSLTCTKPLVAYLLRrSHSRSCS-----GKDWCLMCELEQHVMML-RASGGPLSASRILSQMRSINCQIGDGSQEDAHEFL 492
           9*****************************44455554.....6678**********766.9999******************************* PP
   S: 97   aflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcLe 192
           + l+ ++++ +                ++l  e + ++  ++++l++++F+g+l+s++kcl+cd++s+r+e+ +dl+l++ g  e    slqd+L 
   Q: 493  RLLVASMQSIC---------------LERLGGETKVDPRLQETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVE----SLQDALT 569
           ***********...............22344556788999******************************************996....8****** PP
   S: 193  sftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsG 288
           +ft++e l+gen+y c++c ++++a+k+l++++ P++L++ LkRf    ++++  kink+++fp++Ld+ pf+t++  ++  +  Y L+av+vH  
   Q: 570  QFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRF----QEGRYGKINKCISFPEMLDMIPFMTRTG-DV--PPLYMLYAVIVHLD 658
           *********************************************....458889********************44.44..9***********99 PP
   S: 289  sls...sGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           +l+   sGHY++yvk+ +g+W+++dDs++++v++++v +   + aY+lfY+r
   Q: 659  TLNasfSGHYISYVKDLRGNWFRIDDSEIHQVPMTQVMS---EGAYMLFYMR 707
           7664458********************************...********98 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MLEPRGADIP ILFLVLVVLP VVAYILLGKW SETSEKRGKA NLLAQMAAEE AFRAETDVRG 60
VRFETMATEN RALRTKTRNA PAASGSLRAD FDAEQRPDSV AVATCGVPVN TEGHVCARCL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCGAAC CAAGGGGAGC GGACATACCA ATATTGTTCC TGGTTTTGGT TGTACTTCCT 60
GTTGTAGCTT ACATATTGTT AGGTAAATGG AGTGAAACTT CTGAAAAAAG AGGAAAGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR002893--Znf_MYND

PROSITE

PS00972--USP_1
PS50235--USP_3
PS50865--ZF_MYND_2

Pfam

PF00443--UCH
PF01753--zf-MYND

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000426	Aegilops tauschii	48.52	3.00e-156	545.00
IUUC-Atr-003062	Amborella trichopoda	44.13	4.00e-153	535.00
IUUC-Bol-016470	Brassica oleracea	92.77	0.00e+00	1559.00
IUUC-Gma-043603	Glycine max	61.67	0.00e+00	674.00
IUUC-Mac-065271	Musa acuminata	68.01	3.00e-167	582.00
IUUC-Pop-099645	Populus trichocarpa	58.44	0.00e+00	748.00
IUUC-Tca-121618	Theobroma cacao	69.22	0.00e+00	727.00
IUUC-Tae-123144	Triticum aestivum	46.29	6.00e-148	517.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence