iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112563

Ensembl Protein ID

PGSC0003DMT400075792

UniProt Accession

M1CVQ0; M1CVQ0_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG401029469	PGSC0003DMT400075790	PGSC0003DMT400075790
PGSC0003DMG401029469	PGSC0003DMT400075792	PGSC0003DMT400075792
PGSC0003DMG401029469	PGSC0003DMT400075793	PGSC0003DMT400075793

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.90e-09	36.8	302	343

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl++++dg  ++ lpC+H+fh +C+ kw       + +++CPlC+
   Q: 302  CCICLTSYEDGaeLHALPCNHHFHSTCIVKW------LKMNATCPLCK 343
           ********7776699****************......**********7 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MATEPPSMIS SDPTTPLLHR RLENGGRGGR QSSLAVLLGR VTGRRGGGGG GGASLLVRET 60
AARELDERRA DWGYSKPVVA LDMMWNLGFV IVSVVILSCA VDESPNVPIR VWICGYALQC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCACCCCCCA GTGACACCAA ATTCATCAAA AGTTTCAGCA AAAACTCAAA TACGTCAGCT 60
AAATCAACAC TTATCGATGA GGTGATTATA GTGATAATCA AGATTCAGTT TTTGTTGAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006309	Arabidopsis lyrata	67.75	1.00e-109	388.00
IUUC-Ath-007135	Arabidopsis thaliana	68.42	6.00e-111	392.00
IUUC-Bol-015503	Brassica oleracea	67.33	2.00e-96	344.00
IUUC-Bra-017341	Brassica rapa	67.77	1.00e-99	355.00
IUUC-Gma-042852	Glycine max	72.67	3.00e-103	367.00
IUUC-Lpe-050934	Leersia perrieri	53.53	2.00e-88	318.00
IUUC-Mtr-058387	Medicago truncatula	70.11	5.00e-99	352.00
IUUC-Mac-064512	Musa acuminata	62.61	2.00e-92	331.00
IUUC-Obr-076831	Oryza brachyantha	56.54	5.00e-71	259.00
IUUC-Ogu-077960	Oryza glumaepatula	48.34	4.00e-80	290.00
IUUC-Oin-079107	Oryza indica	47.81	2.00e-76	277.00
IUUC-Olo-080835	Oryza longistaminata	46.47	2.00e-61	228.00
IUUC-Ome-081564	Oryza meridionalis	55.81	7.00e-83	299.00
IUUC-Oni-082731	Oryza nivara	48.64	1.00e-80	292.00
IUUC-Opu-083749	Oryza punctata	55.84	2.00e-82	297.00
IUUC-Oru-084835	Oryza rufipogon	48.64	1.00e-80	292.00
IUUC-Pop-098913	Populus trichocarpa	69.03	1.00e-105	375.00
IUUC-Ppe-101978	Prunus persica	67.31	1.00e-108	385.00
IUUC-Sit-110199	Setaria italica	57.00	3.00e-83	300.00
IUUC-Sly-110887	Solanum lycopersicum	95.47	8.00e-166	575.00
IUUC-Sbi-114428	Sorghum bicolor	57.52	2.00e-81	294.00
IUUC-Tca-121328	Theobroma cacao	75.51	5.00e-106	376.00
IUUC-Tae-125157	Triticum aestivum	57.79	4.00e-71	260.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence