iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oba-075243

Ensembl Protein ID

OBART04G18400.1

UniProt Accession

A0A0D3FXU4; A0A0D3FXU4_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OBART04G18400	OBART04G18400.1	OBART04G18400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.80e-27	93.8	657	694
UBD/Beta-Prp	5.00e-46	158.2	623	768

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gH+++v ++++ s+  +l+s s D  +kvW++++g++++
   Q: 657  GHNSEVQSVCWdSSgQYLASVSQD-LVKVWSISSGDCTH 694
           8**********9556*********.9***********97 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp.sgdk 108
           v f p++ +++++ + + + ++dv+t  +  +l+gh++ev++v+++++g++l+++s+D ++kvw++s+g+c+h ++ + ++  s+ f+p ++d 
   Q: 623  VRFQPNTGQFLAAATENVVSIFDVETNGKKYTLQGHNSEVQSVCWDSSGQYLASVSQD-LVKVWSISSGDCTHEVSSNGNKFHSCVFHPgYTDL 715
           789999999999999******************************************9.89****************************999** PP
   S: 109  lvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
           lv+G+  + +++w++ ++q +  t + h+g++  ++ +p + +++s+s D+ v+lW
   Q: 716  LVIGG-YQSLELWNMVKNQSM--TVQAHEGLIAALAQSPITGMVASASHDNSVKLW 768
           ****9.8999***********..7999***************************** PP

Organism

Oryza barthii

Protein Sequence
(Fasta)

MAQSNWEADK MLDVYIYDYL LKRNLQATAK SFMAEGKVSA DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSEIAAAYLE AQQTKAREHQ QQMQMQQLQL IQQRHAQLQR TNATHPSLNG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAACGGGCCC ACACTACCGT CTCTTCCCCC CCCTCCCTTC CCTTCCCTTC CCTTCCCTCC 60
CCTTGCGCAT CGTTGGCGCT CCGCTCGGTG TGCGGGCACG CTGACCAGCG GGGGTTTCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002717	Amborella trichopoda	61.69	0.00e+00	914.00
IUUC-Aly-006471	Arabidopsis lyrata	62.31	0.00e+00	858.00
IUUC-Ath-007671	Arabidopsis thaliana	61.06	0.00e+00	861.00
IUUC-Bdi-014855	Brachypodium distachyon	83.92	0.00e+00	1259.00
IUUC-Bol-016419	Brassica oleracea	58.04	0.00e+00	845.00
IUUC-Bra-017537	Brassica rapa	57.95	0.00e+00	826.00
IUUC-Gma-044008	Glycine max	64.56	0.00e+00	926.00
IUUC-Lpe-051527	Leersia perrieri	90.90	0.00e+00	1372.00
IUUC-Mtr-058582	Medicago truncatula	64.40	0.00e+00	924.00
IUUC-Mac-064608	Musa acuminata	70.46	0.00e+00	1032.00
IUUC-Obr-076847	Oryza brachyantha	92.16	0.00e+00	1376.00
IUUC-Ogl-077774	Oryza glaberrima	96.97	0.00e+00	1443.00
IUUC-Ogu-077963	Oryza glumaepatula	96.25	0.00e+00	1441.00
IUUC-Oin-080026	Oryza indica	96.97	0.00e+00	1442.00
IUUC-Olo-080947	Oryza longistaminata	96.75	0.00e+00	1382.00
IUUC-Ome-081723	Oryza meridionalis	94.80	0.00e+00	1430.00
IUUC-Oni-083036	Oryza nivara	96.12	0.00e+00	1440.00
IUUC-Opu-083248	Oryza punctata	95.85	0.00e+00	1432.00
IUUC-Oru-084534	Oryza rufipogon	96.85	0.00e+00	1443.00
IUUC-Pop-099999	Populus trichocarpa	62.77	0.00e+00	912.00
IUUC-Ppe-101896	Prunus persica	65.53	0.00e+00	907.00
IUUC-Smo-109593	Selaginella moellendorffii	48.68	0.00e+00	657.00
IUUC-Sit-110618	Setaria italica	84.95	0.00e+00	1285.00
IUUC-Sly-111127	Solanum lycopersicum	61.82	0.00e+00	867.00
IUUC-Stu-112404	Solanum tuberosum	62.12	0.00e+00	863.00
IUUC-Sbi-114046	Sorghum bicolor	83.35	0.00e+00	1268.00
IUUC-Tca-121754	Theobroma cacao	63.45	0.00e+00	882.00
IUUC-Tae-125446	Triticum aestivum	81.28	0.00e+00	1226.00
IUUC-Vvi-130936	Vitis vinifera	63.72	0.00e+00	935.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence