iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ame-010874

Ensembl Protein ID

ENSAMXP00000010932.1

UniProt Accession

W5KTM0; W5KTM0_ASTMX

Genbank Protein ID

ENSAMXP00000010932

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

APWO01021866

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMXG00000010642.1	ENSAMXT00000010932.1	ENSAMXP00000010932.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-15	54.7	51	85

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           H++++t++++ ++ +++v+++ D + +vW l++gv
   Q: 51   HSGRITGIDWaPEsNRIVTCASDRNAYVWTLKDGV 85
           9**********888****************99997 PP

Organism

Astyanax mexicanus

Protein Sequence
(Fasta)

MSLYSFGLEP LSCHAWNKDR TQIAVSPNSS TVIIYQKKGK EWSKIHELKE HSGRITGIDW 60
APESNRIVTC ASDRNAYVWT LKDGVWKPTL VLVRINRAAT CVKWSPQENK FALGSGAKLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAGTCATAT CCTTTCCTCA GATGCTGGTT GGACACACCC TCCTCTCCCT CATAGCTTAC 60
TCTGCCTGCA CTTCACTCTT CAGCTTCATT CGTGTCGACT GCCCAGAGTC CACGGACACA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	43.42	1.00e-61	230.00
IUUC-Dre-027781	Danio rerio	86.80	0.00e+00	649.00
IUUC-Gmo-038608	Gadus morhua	80.39	2.00e-173	601.00
IUUC-Gac-042536	Gasterosteus aculeatus	84.31	0.00e+00	637.00
IUUC-Hvu-047456	Hordeum vulgare	31.46	4.00e-17	80.90
IUUC-Loc-051844	Lepisosteus oculatus	81.84	4.00e-178	617.00
IUUC-Ont-072444	Oreochromis niloticus	81.51	3.00e-179	620.00
IUUC-Ola-086754	Oryzias latipes	81.23	2.00e-180	624.00
IUUC-Pfo-097144	Poecilia formosa	84.27	1.00e-171	595.00
IUUC-Pop-098954	Populus trichocarpa	36.68	1.00e-42	166.00
IUUC-Tru-118343	Takifugu rubripes	82.58	2.00e-180	624.00
IUUC-Tae-123562	Triticum aestivum	41.95	6.00e-69	254.00
IUUC-Tur-126640	Triticum urartu	40.93	3.00e-67	248.00
IUUC-Xtr-131770	Xenopus tropicalis	68.63	9.00e-158	549.00
IUUC-Xma-134294	Xiphophorus maculatus	83.71	1.00e-170	592.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence