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Tag Content
UUCD2 ID IUUC-Sbi-114404
UUCD1 version UUC-SoB-01640
Ensembl Protein ID Sb07g023880.1
UniProt Accession C5YMV1; C5YMV1_SORBI
Genbank Protein ID EES14068.1
Protein Name Ubiquitin carboxyl-terminal hydrolase
Genbank Nucleotide ID CM000766
Gene Name SORBI_007G165900
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb07g023880 Sb07g023880.1 Sb07g023880.1
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/UCH 2.60e-60 205.4 2 322
Active Site
Position(s) Description Evidence
82 Nucleophile {ECO:0000256|PIRSR:PIRSR038120-1}
155 Proton donor {ECO:0000256|PIRSR:PIRSR038120-1}
Domain Profile

   DUB/UCH

   S: 7    ewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakqvigNsCaty 102
    +w +e dPg+ft+l+++ +k+ qv+elysLd + l+ + +p++gl+ l+k+ + ++ +r v +d+i ++ffa+q i+N+Cat+
   Q: 2 SWAAIENDPGVFTELLQQMQLKGL-QVDELYSLDLDALSDL-QPIYGLIVLYKWRPPEKDER----------PVIKDAIPNLFFANQIINNACATQ 85
    7***********************.****************.9*************998888..........344799****************** PP
   S: 103 AllsvllncedklldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfvsyvningrlyeldglkp 198
    A+lsvlln l ++l++lke+ k pe k+la+ n +++ +ns+ar+e ++e++ +++ +++++hf+syv+++g lyeldglk+
   Q: 86 AILSVLLNSPGI--TLSDELKKLKEFAKDLPPELKGLAIVNCASIRMLNNSFARSEVSEEQKPHSK-----DDDVYHFISYVPVDGVLYELDGLKE 174
    ********8776..89****************************************9999876644.....5899********************* PP
   S: 199 fPldlgkk...keteelkdklkvvraflerikllesdeirfnllaivadrrviktlrlnvlkid.................keLlkLlkdieseee 274
    P+ lgk+ + + ++ v+ e i++ +++eirf+++ai ++r+ + t l+ l+ + + l ++ +++e
   Q: 175 GPISLGKCpggIGDAGWLRLVQPVI--KEHIDMFSQNEIRFSVMAILKNRKEMFTVELKDLQRKresllqqmgdpsairhvPSVEQSLAEVAAQIE 268
    *******976557889999999999..************************999998876666679************999445556677777777 PP
   S: 275 kieaqlddekekrkkfkiddirRtenydeficifikdlaregilrklveetise 328
    +++ e+ek kk+k ++ rR++ny+ f++ f+k l ++++l+ l e+ +
   Q: 269 SVTEKIIMEEEKSKKWKTENLRRKHNYVPFLFNFLKILEEKQQLKPLIEKAKAK 322
    777788889**************************************9986544 PP
   

Organism Sorghum bicolor
Protein Sequence
(Fasta)
MSWAAIENDP GVFTELLQQM QLKGLQVDEL YSLDLDALSD LQPIYGLIVL YKWRPPEKDE 60
RPVIKDAIPN LFFANQIINN ACATQAILSV LLNSPGITLS DELKKLKEFA KDLPPELKGL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sbi-114404|DUB,UCH|Sorghum bicolor
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGTCGTGGG CCGCAATAGA GAATGATCCT GGTAAATTTA TTTTCTGTTG CCAAAAGTCT 60
ATACATTTGT TTGGTTATAC ATTGCAAGTT TTTTCTTTTT TAGCACATGT TCCAAGCATG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sbi-114404|DUB,UCH|Sorghum bicolor
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH
IPR017390--Ubiquitinyl_hydrolase_UCH37

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005737--C:cytoplasm
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG sbi:SORBI_07g023880
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000878 Aegilops tauschii 81.98 9.00e-146 508.00
IUUC-Bdi-014551 Brachypodium distachyon 85.98 2.00e-157 547.00
IUUC-Oba-075354 Oryza barthii 87.42 3.00e-155 540.00
IUUC-Obr-076886 Oryza brachyantha 86.97 2.00e-148 517.00
IUUC-Ogu-078511 Oryza glumaepatula 86.24 4.00e-154 536.00
IUUC-Olo-080482 Oryza longistaminata 86.24 3.00e-155 540.00
IUUC-Oni-082729 Oryza nivara 86.50 3.00e-153 533.00
IUUC-Opu-084139 Oryza punctata 86.85 2.00e-155 540.00
IUUC-Oru-084441 Oryza rufipogon 86.85 2.00e-155 541.00
IUUC-Osa-085606 Oryza sativa 86.85 3.00e-155 540.00
IUUC-Sit-110523 Setaria italica 93.06 4.00e-167 579.00
IUUC-Tae-123169 Triticum aestivum 85.41 2.00e-149 520.00
IUUC-Tur-126366 Triticum urartu 84.95 2.00e-143 500.00
Created Date 25-Jun-2017

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