iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017204

Ensembl Protein ID

Bra005461.1-P

UniProt Accession

M4CMM3; M4CMM3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra005461	Bra005461.1	Bra005461.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.50e-15	56.6	242	284
E3 activity/RING/U-box	3.30e-08	34.5	239	293

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgpl..vlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl  + + ++  vlp C+H+f +dC+ +w        ++ +CP+Cr
   Q: 242  CPVCLRLIPKNVVikVLPnCKHMFDEDCIGRW------LETHVTCPVCR 284
           *****99955566234669*************......**********8 PP

E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvv...lp.sGitydrssIekwlasggktcPvtrqplteedlv 56
           e  Cp+ l l    vv   lp + + +d  +I +wl++  + cPv+r+  ++   +
   Q: 239  EIECPVCLRLIPKNVVikvLPnCKHMFDEDCIGRWLETHVT-CPVCRRMAEPMAST 293
           66799999988888862225689************888777.*****987766555 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGFNDPSLNS IILWFAAVTS LLTISVIFIF LFMCLLKRRR LVDVLPETED DHHHRRREPP 60
GQGLSASVIA AFPTFSYKPD NNDPESNNQE IECPVCLGLI PKNVVIKVLP NCKHMFDEEC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTCA ACGACCCTTC GTTAAACTCA ATCATCCTTT GGTTCGCCGC CGTAACGTCT 60
CTCTTGACTA TCTCCGTTAT CTTCATCTTT CTATTTATGT GTTTGCTCAA ACGCCGTAGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005979	Arabidopsis lyrata	85.92	8.00e-68	248.00
IUUC-Ath-006999	Arabidopsis thaliana	82.67	2.00e-69	253.00
IUUC-Bol-015201	Brassica oleracea	96.71	2.00e-84	303.00
IUUC-Opu-083475	Oryza punctata	31.84	8.00e-25	107.00
IUUC-Oru-084930	Oryza rufipogon	29.41	1.00e-20	94.70
IUUC-Sbi-114595	Sorghum bicolor	26.12	1.00e-21	97.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence