iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112550

Ensembl Protein ID

PGSC0003DMT400063239

UniProt Accession

M1CAA9; M1CAA9_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400024595	PGSC0003DMT400063238	PGSC0003DMT400063238
PGSC0003DMG400024595	PGSC0003DMT400063239	PGSC0003DMT400063239

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-08	34.5	74	116

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cle f   ++  ++l+ C+H fh +C+  w       +k++ CP+Cr
   Q: 74   CAVCLENFkvgEK-CRLLSkCNHRFHVQCIDSW------LQKTAVCPICR 116
           ********88744.555555*************......**********8 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MEIVVSVMLL LVGIAVLVFI HVCIVGRAFT SRNGINGTIF NQTNVNRHTS MSQEDIKKLP 60
CFDYKMESTS PVDCAVCLEN FKVGEKCRLL SKCNHRFHVQ CIDSWLQKTA VCPICRASAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTACGCCAGG CGTACTACAA ATTAATTTAC CTTCAAATTC TTATTTTCCT TTTTTTCCTA 60
AGCGAGCAGC GTAATTAAAT TTGGATTCGG GCTGAACACA ATTTACCTCC CTTCAAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014085	Brachypodium distachyon	44.44	4.00e-18	82.80
IUUC-Gma-043176	Glycine max	46.94	6.00e-34	135.00
IUUC-Hvu-047516	Hordeum vulgare	33.06	9.00e-20	87.80
IUUC-Lpe-050695	Leersia perrieri	38.60	1.00e-19	89.00
IUUC-Mtr-058030	Medicago truncatula	49.66	1.00e-33	134.00
IUUC-Oba-075422	Oryza barthii	40.66	2.00e-17	80.50
IUUC-Obr-076102	Oryza brachyantha	38.96	1.00e-16	77.40
IUUC-Ogl-077524	Oryza glaberrima	44.59	9.00e-18	81.60
IUUC-Ogu-078627	Oryza glumaepatula	40.66	2.00e-17	80.90
IUUC-Oin-079447	Oryza indica	40.00	4.00e-17	79.70
IUUC-Ome-081232	Oryza meridionalis	40.66	2.00e-17	80.90
IUUC-Oni-083005	Oryza nivara	41.86	2.00e-16	77.40
IUUC-Opu-083323	Oryza punctata	47.06	1.00e-16	78.20
IUUC-Oru-084954	Oryza rufipogon	40.00	4.00e-17	79.70
IUUC-Osa-085651	Oryza sativa	40.00	4.00e-17	79.70
IUUC-Sly-111913	Solanum lycopersicum	85.00	2.00e-67	246.00
IUUC-Sbi-114425	Sorghum bicolor	36.36	1.00e-13	67.40
IUUC-Tca-121009	Theobroma cacao	55.00	7.00e-39	154.00
IUUC-Tae-125001	Triticum aestivum	38.46	9.00e-20	88.60
IUUC-Tur-126037	Triticum urartu	36.04	3.00e-20	90.10
IUUC-Vvi-131134	Vitis vinifera	37.19	2.00e-21	94.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence