iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111598

Ensembl Protein ID

Solyc02g079740.1.1

UniProt Accession

K4B9J5; K4B9J5_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g079740.1	Solyc02g079740.1.1	Solyc02g079740.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-29	103.0	7	75

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqpl.teedlvPnltlrrliqawc 69
            p++f+CpIsle+M+dPv+l+sG+t+drssI++w++sg++tcP+t+ p+ ++ +l+Pn++lr+li+++ 
   Q: 7    FPDDFRCPISLEIMSDPVILSSGHTFDRSSIQRWVDSGHRTCPITKLPIsDPVSLIPNHALRSLISNYT 75
           69***********************************************8899************9985 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MATSTQFPDD FRCPISLEIM SDPVILSSGH TFDRSSIQRW VDSGHRTCPI TKLPISDPVS 60
LIPNHALRSL ISNYTLVSFP KPLTYPEPQS LIQTLIASSS SNLDSKLHSL DQLSKLSKRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAACTT CAACCCAGTT CCCGGACGAT TTTCGGTGCC CGATTTCCCT TGAAATTATG 60
TCCGACCCGG TTATTCTGTC GTCGGGTCAC ACCTTCGACC GCTCTTCAAT CCAACGGTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sly:101243851

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002776	Amborella trichopoda	48.11	2.00e-70	258.00
IUUC-Aly-006175	Arabidopsis lyrata	59.89	3.00e-109	387.00
IUUC-Ath-006926	Arabidopsis thaliana	58.87	7.00e-109	386.00
IUUC-Bol-015331	Brassica oleracea	58.58	2.00e-92	331.00
IUUC-Bra-017717	Brassica rapa	58.22	8.00e-84	303.00
IUUC-Gma-043375	Glycine max	63.26	1.00e-97	348.00
IUUC-Mtr-058590	Medicago truncatula	58.38	6.00e-107	379.00
IUUC-Ogl-077816	Oryza glaberrima	42.27	8.00e-33	133.00
IUUC-Oni-083095	Oryza nivara	41.99	2.00e-32	132.00
IUUC-Opu-084129	Oryza punctata	42.47	1.00e-35	143.00
IUUC-Pop-099846	Populus trichocarpa	63.23	2.00e-119	421.00
IUUC-Ppe-101638	Prunus persica	64.96	1.00e-123	435.00
IUUC-Sit-110168	Setaria italica	45.68	2.00e-48	185.00
IUUC-Stu-112509	Solanum tuberosum	91.13	2.00e-172	597.00
IUUC-Tca-121293	Theobroma cacao	65.11	5.00e-127	446.00
IUUC-Tae-124445	Triticum aestivum	43.21	1.00e-54	206.00
IUUC-Vvi-131324	Vitis vinifera	70.05	1.00e-133	468.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence