iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002674

Ensembl Protein ID

ERN19944

UniProt Accession

U5DBN9; U5DBN9_AMBTC

Genbank Protein ID

ERN19944.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI392062

Gene Name

AMTR_s00071p00116490

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00071p00116490	ERN19944	ERN19944

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-23	81.3	111	144

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           H  +v +l++ +d  +l+sGs D+++ +WD+ +g
   Q: 111  HRKDVLDLQWsTDgAFLLSGSVDNSCIIWDVNKG 144
           8889******988899**************9776 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MRGGVVQITW HDAQPVLTLD FHSLTNLLAT GGADKDIKLW ALVQSEAQKK APTACYQTSL 60
PPHHSTAVNV LRFSPSGEQL ASGADGGELA IWKMQSDDRH TWKVLKTLSF HRKDVLDLQW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGGGAG GGGTAGTGCA GATAACATGG CATGACGCAC AACCAGTGCT AACCCTAGAT 60
TTCCACTCTC TTACTAACCT CCTTGCAACT GGCGGTGCAG ACAAAGACAT AAAGGTGATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR001632--Gprotein_B
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0008283--P:cell proliferation
GO:0000724--P:double-strand break repair via homologous recombination
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009933--P:meristem structural organization
GO:0006334--P:nucleosome assembly
GO:0009555--P:pollen development
GO:0010026--P:trichome differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000474	Aegilops tauschii	57.85	1.00e-160	558.00
IUUC-Aml-001755	Ailuropoda melanoleuca	38.98	5.00e-83	300.00
IUUC-Apl-003701	Anas platyrhynchos	36.99	1.00e-85	308.00
IUUC-Aca-004692	Anolis carolinensis	40.34	8.00e-87	313.00
IUUC-Aly-006286	Arabidopsis lyrata	60.04	1.00e-167	582.00
IUUC-Ath-007683	Arabidopsis thaliana	58.78	1.00e-166	578.00
IUUC-Ago-007940	Ashbya gossypii	32.72	1.00e-58	219.00
IUUC-Acl-008070	Aspergillus clavatus	37.37	3.00e-33	135.00
IUUC-Afl-008414	Aspergillus flavus	36.87	2.00e-33	136.00
IUUC-Ani-009399	Aspergillus nidulans	36.36	2.00e-32	132.00
IUUC-Ang-009650	Aspergillus niger	35.27	2.00e-31	129.00
IUUC-Aor-009937	Aspergillus oryzae	36.87	2.00e-33	135.00
IUUC-Ame-011094	Astyanax mexicanus	40.00	7.00e-87	313.00
IUUC-Bta-013423	Bos taurus	39.18	9.00e-85	306.00
IUUC-Bdi-014860	Brachypodium distachyon	65.69	8.00e-151	525.00
IUUC-Bol-016603	Brassica oleracea	58.52	2.00e-163	567.00
IUUC-Bra-017175	Brassica rapa	60.86	3.00e-160	556.00
IUUC-Cel-018272	Caenorhabditis elegans	30.00	2.00e-41	162.00
IUUC-Cja-019558	Callithrix jacchus	40.39	1.00e-85	309.00
IUUC-Cfa-020900	Canis familiaris	38.90	1.00e-81	296.00
IUUC-Cpo-022054	Cavia porcellus	38.52	3.00e-72	265.00
IUUC-Csa-023850	Chlorocebus sabaeus	40.45	2.00e-86	312.00
IUUC-Cho-024510	Choloepus hoffmanni	29.14	5.00e-44	171.00
IUUC-Cin-025178	Ciona intestinalis	35.00	3.00e-72	264.00
IUUC-Cme-027136	Cyanidioschyzon merolae	34.91	4.00e-62	231.00
IUUC-Dre-027879	Danio rerio	36.44	1.00e-88	319.00
IUUC-Dno-029335	Dasypus novemcinctus	39.76	9.00e-85	306.00
IUUC-Dor-030520	Dipodomys ordii	31.75	5.00e-55	207.00
IUUC-Dme-031838	Drosophila melanogaster	38.86	1.00e-81	296.00
IUUC-Eca-033563	Equus caballus	39.95	3.00e-86	311.00
IUUC-Fca-036052	Felis catus	40.49	1.00e-85	309.00
IUUC-Fal-037080	Ficedula albicollis	40.73	3.00e-88	318.00
IUUC-Gmo-039461	Gadus morhua	45.21	2.00e-71	261.00
IUUC-Gga-041133	Gallus gallus	40.73	3.00e-86	311.00
IUUC-Gac-041769	Gasterosteus aculeatus	39.50	5.00e-84	303.00
IUUC-Gma-043339	Glycine max	68.31	1.00e-158	551.00
IUUC-Ggo-044561	Gorilla gorilla	40.94	6.00e-86	310.00
IUUC-Hsa-046150	Homo sapiens	40.94	2.00e-86	312.00
IUUC-Hvu-047792	Hordeum vulgare	65.94	3.00e-102	363.00
IUUC-Itr-048630	Ictidomys tridecemlineatus	40.98	2.00e-86	312.00
IUUC-Kpa-049397	Komagataella pastoris	37.24	2.00e-69	254.00
IUUC-Lch-050365	Latimeria chalumnae	31.99	5.00e-61	227.00
IUUC-Lpe-050875	Leersia perrieri	57.00	2.00e-158	551.00
IUUC-Loc-052770	Lepisosteus oculatus	41.08	2.00e-88	318.00
IUUC-Laf-053505	Loxodonta africana	40.24	6.00e-86	310.00
IUUC-Mcc-054803	Macaca mulatta	40.45	2.00e-86	312.00
IUUC-Meu-056578	Macropus eugenii	40.51	5.00e-36	144.00
IUUC-Mtr-058066	Medicago truncatula	62.82	7.00e-160	556.00
IUUC-Mga-059735	Meleagris gallopavo	39.72	3.00e-86	311.00
IUUC-Mmr-061343	Microcebus murinus	40.45	2.00e-86	311.00
IUUC-Mdo-062065	Monodelphis domestica	40.05	5.00e-86	310.00
IUUC-Mmu-063501	Mus musculus	40.49	3.00e-84	304.00
IUUC-Mac-064864	Musa acuminata	67.89	6.00e-178	615.00
IUUC-Mpu-066549	Mustela putorius furo	39.17	2.00e-83	302.00
IUUC-Mlu-067121	Myotis lucifugus	38.90	9.00e-85	306.00
IUUC-Nle-069854	Nomascus leucogenys	40.94	6.00e-86	310.00
IUUC-Opr-070803	Ochotona princeps	37.22	1.00e-73	269.00
IUUC-Ont-071642	Oreochromis niloticus	41.83	1.00e-87	316.00
IUUC-Oan-073675	Ornithorhynchus anatinus	41.32	8.00e-87	313.00
IUUC-Ocu-073863	Oryctolagus cuniculus	40.25	3.00e-83	300.00
IUUC-Oba-075682	Oryza barthii	65.21	1.00e-151	528.00
IUUC-Obr-076039	Oryza brachyantha	57.62	4.00e-158	550.00
IUUC-Ogu-078021	Oryza glumaepatula	67.15	1.00e-158	551.00
IUUC-Oin-079908	Oryza indica	58.19	3.00e-126	444.00
IUUC-Olo-081063	Oryza longistaminata	67.15	6.00e-159	552.00
IUUC-Ome-081930	Oryza meridionalis	58.35	4.00e-158	550.00
IUUC-Oni-082547	Oryza nivara	66.91	7.00e-158	549.00
IUUC-Opu-084089	Oryza punctata	66.91	1.00e-154	539.00
IUUC-Oru-084844	Oryza rufipogon	67.15	2.00e-158	551.00
IUUC-Osa-085582	Oryza sativa	67.15	2.00e-158	551.00
IUUC-Ola-087187	Oryzias latipes	40.73	1.00e-85	309.00
IUUC-Olu-087792	Ostreococcus lucimarinus	37.34	3.00e-73	268.00
IUUC-Oga-088390	Otolemur garnettii	40.45	3.00e-86	311.00
IUUC-Oar-089740	Ovis aries	38.97	1.00e-79	289.00
IUUC-Ptr-091581	Pan troglodytes	40.94	2.00e-86	311.00
IUUC-Pan-092258	Papio anubis	37.07	4.00e-76	277.00
IUUC-Psi-093761	Pelodiscus sinensis	35.73	1.00e-86	312.00
IUUC-Ppa-095428	Physcomitrella patens	55.39	3.00e-130	457.00
IUUC-Pfo-097357	Poecilia formosa	40.73	9.00e-89	320.00
IUUC-Pab-098520	Pongo abelii	40.94	6.00e-86	310.00
IUUC-Pop-099331	Populus trichocarpa	63.44	2.00e-172	597.00
IUUC-Ppe-101548	Prunus persica	67.10	0.00e+00	628.00
IUUC-Pva-103243	Pteropus vampyrus	42.73	1.00e-79	289.00
IUUC-Rno-105202	Rattus norvegicus	40.24	1.00e-83	302.00
IUUC-Sce-106250	Saccharomyces cerevisiae	30.96	4.00e-61	227.00
IUUC-Sha-107036	Sarcophilus harrisii	40.54	3.00e-86	311.00
IUUC-Sja-107912	Schizosaccharomyces japonicus	35.80	2.00e-70	258.00
IUUC-Spo-108050	Schizosaccharomyces pombe	33.55	5.00e-62	230.00
IUUC-Sit-109838	Setaria italica	56.27	5.00e-159	553.00
IUUC-Sly-110872	Solanum lycopersicum	64.33	7.00e-174	602.00
IUUC-Stu-111933	Solanum tuberosum	63.16	3.00e-170	590.00
IUUC-Sbi-114587	Sorghum bicolor	55.69	2.00e-156	544.00
IUUC-Ssc-115462	Sus scrofa	40.25	1.00e-85	309.00
IUUC-Tgu-117186	Taeniopygia guttata	40.98	7.00e-88	316.00
IUUC-Tru-118310	Takifugu rubripes	37.93	2.00e-87	315.00
IUUC-Tsy-118927	Tarsius syrichta	38.81	6.00e-56	210.00
IUUC-Tni-120832	Tetraodon nigroviridis	40.82	4.00e-85	307.00
IUUC-Tca-121584	Theobroma cacao	65.59	5.00e-179	619.00
IUUC-Tae-124063	Triticum aestivum	57.85	3.00e-160	556.00
IUUC-Tur-126239	Triticum urartu	57.65	3.00e-160	557.00
IUUC-Tme-127108	Tuber melanosporum	34.43	2.00e-60	225.00
IUUC-Ttr-129010	Tursiops truncatus	41.75	9.00e-86	309.00
IUUC-Vpa-130374	Vicugna pacos	35.58	3.00e-23	102.00
IUUC-Vvi-131136	Vitis vinifera	67.45	3.00e-178	616.00
IUUC-Xtr-132141	Xenopus tropicalis	38.62	5.00e-86	310.00
IUUC-Xma-133980	Xiphophorus maculatus	41.71	6.00e-89	320.00
IUUC-Yli-134457	Yarrowia lipolytica	39.88	3.00e-30	125.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence