iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057939

Ensembl Protein ID

KEH42723

UniProt Accession

A0A072VMQ3; A0A072VMQ3_MEDTR

Genbank Protein ID

KEH42723.1

Protein Name

RING-H2 finger protein ATL16, putative

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g074190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g074190	KEH42723	KEH42723

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-08	36.9	131	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  ++ +++ p C Hvfh dC+  w       +++++CPlCr
   Q: 131  CAVCLNEFqqDEKLRIIPnCSHVFHIDCIDVW------LQNNANCPLCR 173
           ********88555999999*************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MDLVNRKYLI HFSSQALGPT SSSSIFHPPH MHHSSTSFPI IAIAIIGILA TIFLLVSYYI 60
FVIKCCLNWH RIDLLRRFSP SRRRQDPTTI HSPGIEPRGL DEAVIRLIPV IQFKAEEGNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTATATATA AAATATTAAA CATTGATCGA GACACTCTTT GTGGAACAAA TTTCTAGCCA 60
GAAGTCTCTG AAAACCACTG AGAAAATTCA CCAACAACTA CGTAGTATCC ACACTCCAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_1g074190

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000279	Aegilops tauschii	39.25	2.00e-31	129.00
IUUC-Atr-003120	Amborella trichopoda	42.59	3.00e-45	175.00
IUUC-Aly-006068	Arabidopsis lyrata	50.44	6.00e-74	270.00
IUUC-Ath-006598	Arabidopsis thaliana	50.89	3.00e-75	274.00
IUUC-Bdi-015043	Brachypodium distachyon	33.48	6.00e-28	117.00
IUUC-Bol-016276	Brassica oleracea	48.14	2.00e-71	262.00
IUUC-Bra-017431	Brassica rapa	53.52	9.00e-74	270.00
IUUC-Gma-043661	Glycine max	67.91	4.00e-122	430.00
IUUC-Hvu-047348	Hordeum vulgare	40.58	7.00e-31	127.00
IUUC-Lpe-051091	Leersia perrieri	37.36	1.00e-35	142.00
IUUC-Mac-064540	Musa acuminata	47.12	4.00e-56	211.00
IUUC-Oba-075181	Oryza barthii	39.93	5.00e-36	144.00
IUUC-Obr-076646	Oryza brachyantha	40.51	1.00e-39	155.00
IUUC-Ogl-077643	Oryza glaberrima	39.93	4.00e-36	144.00
IUUC-Ogu-078678	Oryza glumaepatula	39.93	5.00e-36	144.00
IUUC-Oin-080156	Oryza indica	38.25	1.00e-36	145.00
IUUC-Olo-080454	Oryza longistaminata	39.78	8.00e-38	150.00
IUUC-Ome-081367	Oryza meridionalis	36.32	2.00e-29	122.00
IUUC-Oni-082085	Oryza nivara	39.57	8.00e-36	144.00
IUUC-Opu-083709	Oryza punctata	39.93	4.00e-37	147.00
IUUC-Oru-084579	Oryza rufipogon	39.57	4.00e-35	141.00
IUUC-Osa-085466	Oryza sativa	38.41	6.00e-35	140.00
IUUC-Pop-098991	Populus trichocarpa	61.61	1.00e-86	312.00
IUUC-Ppe-101210	Prunus persica	65.37	1.00e-95	342.00
IUUC-Sit-109832	Setaria italica	38.03	8.00e-33	133.00
IUUC-Sly-111856	Solanum lycopersicum	55.56	2.00e-74	271.00
IUUC-Stu-111992	Solanum tuberosum	56.29	7.00e-78	283.00
IUUC-Sbi-114476	Sorghum bicolor	37.50	4.00e-31	127.00
IUUC-Tca-121116	Theobroma cacao	64.00	5.00e-101	360.00
IUUC-Tae-124958	Triticum aestivum	39.72	5.00e-32	130.00
IUUC-Tur-126127	Triticum urartu	37.44	4.00e-29	120.00
IUUC-Vvi-131101	Vitis vinifera	63.02	1.00e-81	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence