iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099666

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_831736; POPTR_0006s00270g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s00270	POPTR_0006s00270.1	POPTR_0006s00270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.00e-06	28.1	318	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH d  ++ a+ +d +++++G+ D+t+++WD 
   Q: 318  GHVDFSFASAWhPDgRIFATGNQDKTCRIWDA 349
           56666677799*99999**************5 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSQYQGDEMD HVVDDYEIAE VDDDVYFHGR FMADSESEDD DDDDEYDHLD NKITDTSAAD 60
ARKGKDIQGI PWERLSISRE KYRQTRLEQY KNYENVPQSG ESSEKECEPI KKGGMFYEFW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GACGAAGCAA AATAAGGCGA CGGGAAACAG ATAGTGAATC AGTATCAGTA TCAGTATCAG 60
TATCAGCATC AGGACACGGC GGAGGCGGCG GTAGTAGATG TGTCTTGTAT GACCATGCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0006s00270g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	77.56	0.00e+00	672.00
IUUC-Atr-003022	Amborella trichopoda	80.46	0.00e+00	691.00
IUUC-Aly-006558	Arabidopsis lyrata	74.37	4.00e-178	616.00
IUUC-Ath-006618	Arabidopsis thaliana	73.87	2.00e-176	611.00
IUUC-Bdi-014834	Brachypodium distachyon	76.94	0.00e+00	665.00
IUUC-Bol-015525	Brassica oleracea	74.31	0.00e+00	642.00
IUUC-Bra-016810	Brassica rapa	74.62	0.00e+00	645.00
IUUC-Cre-022745	Chlamydomonas reinhardtii	27.49	6.00e-20	90.90
IUUC-Dse-031456	Dothistroma septosporum	32.30	4.00e-42	165.00
IUUC-Gma-043838	Glycine max	82.62	0.00e+00	769.00
IUUC-Hvu-047631	Hordeum vulgare	67.26	2.00e-173	600.00
IUUC-Kpa-049267	Komagataella pastoris	26.35	1.00e-27	117.00
IUUC-Lpe-050907	Leersia perrieri	70.60	1.00e-171	595.00
IUUC-Mtr-058694	Medicago truncatula	82.10	0.00e+00	766.00
IUUC-Mvi-060306	Microbotryum violaceum	30.06	7.00e-09	55.50
IUUC-Mac-065126	Musa acuminata	78.84	0.00e+00	684.00
IUUC-Oba-075716	Oryza barthii	75.63	0.00e+00	654.00
IUUC-Obr-076195	Oryza brachyantha	61.12	3.00e-170	590.00
IUUC-Ogl-077272	Oryza glaberrima	74.88	0.00e+00	650.00
IUUC-Ogu-078041	Oryza glumaepatula	75.63	0.00e+00	655.00
IUUC-Oin-079991	Oryza indica	67.51	1.00e-171	595.00
IUUC-Olo-080659	Oryza longistaminata	60.15	1.00e-145	508.00
IUUC-Ome-081872	Oryza meridionalis	65.63	2.00e-161	561.00
IUUC-Oni-082371	Oryza nivara	75.88	0.00e+00	657.00
IUUC-Opu-083680	Oryza punctata	67.01	2.00e-171	594.00
IUUC-Oru-085156	Oryza rufipogon	75.63	0.00e+00	655.00
IUUC-Osa-086197	Oryza sativa	75.63	0.00e+00	655.00
IUUC-Pte-104305	Pyrenophora teres	29.58	3.00e-47	182.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	29.84	2.00e-46	179.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	30.83	1.00e-44	173.00
IUUC-Smo-109252	Selaginella moellendorffii	61.10	4.00e-150	523.00
IUUC-Sit-110341	Setaria italica	75.39	7.00e-178	615.00
IUUC-Sly-111343	Solanum lycopersicum	79.20	0.00e+00	696.00
IUUC-Stu-112207	Solanum tuberosum	79.20	0.00e+00	694.00
IUUC-Sbi-113791	Sorghum bicolor	75.44	0.00e+00	653.00
IUUC-Tca-121187	Theobroma cacao	77.73	0.00e+00	696.00
IUUC-Tae-124470	Triticum aestivum	68.27	4.00e-176	610.00
IUUC-Tur-126622	Triticum urartu	69.96	0.00e+00	651.00
IUUC-Vvi-131183	Vitis vinifera	77.28	0.00e+00	722.00
IUUC-Zma-135672	Zea mays	75.25	0.00e+00	654.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence