iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050384

Ensembl Protein ID

ENSLACP00000003587.1

UniProt Accession

H3A1R6; H3A1R6_LATCH

Genbank Protein ID

ENSLACP00000003587

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01100148

Gene Name

GTF3C2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000003194.1	ENSLACT00000003619.1	ENSLACP00000003587.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-10	40.6	536	568

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlr 31
           H   v+ +a+   ++++l+++++D ++k WDlr
   Q: 536  HDHAVRTIAWckaNSNFLATAGYDRKVKFWDLR 568
           8999********866****************97 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

RPPKEGKKRG PRKKTEAKKQ APAVPVASEN GVPAGSEAAV PVKVYKKRGR KSKAELLAMR 60
LAQGLDAETP EPPNRRNEEP ETTPGGRPKR RAAKVAMRYL HELAQEVEST RQTSETPSTE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGACCTCCTA AAGAGGGCAA GAAGAGAGGC CCCCGCAAGA AGACCGAGGC CAAGAAGCAA 60
GCTCCCGCTG TTCCCGTCGC GTCCGAAAAT GGCGTGCCCG CCGGCTCCGA GGCCGCTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000875	Aegilops tauschii	27.50	3.00e-12	67.80
IUUC-Aml-001488	Ailuropoda melanoleuca	52.24	8.00e-146	511.00
IUUC-Apl-003185	Anas platyrhynchos	53.39	3.00e-149	522.00
IUUC-Aca-005245	Anolis carolinensis	53.97	5.00e-159	555.00
IUUC-Ath-006785	Arabidopsis thaliana	26.44	2.00e-10	61.20
IUUC-Ame-010654	Astyanax mexicanus	47.35	6.00e-118	418.00
IUUC-Bta-012551	Bos taurus	51.86	8.00e-143	501.00
IUUC-Bdi-014228	Brachypodium distachyon	27.37	3.00e-10	60.80
IUUC-Bol-015619	Brassica oleracea	27.00	4.00e-12	67.00
IUUC-Bra-017820	Brassica rapa	27.00	1.00e-11	65.50
IUUC-Cja-019727	Callithrix jacchus	52.28	6.00e-136	478.00
IUUC-Cfa-020469	Canis familiaris	51.02	2.00e-145	509.00
IUUC-Cpo-021854	Cavia porcellus	45.65	8.00e-147	514.00
IUUC-Csa-023726	Chlorocebus sabaeus	52.90	8.00e-139	488.00
IUUC-Cho-024296	Choloepus hoffmanni	56.71	7.00e-80	291.00
IUUC-Dre-028735	Danio rerio	46.17	2.00e-127	450.00
IUUC-Dno-028895	Dasypus novemcinctus	52.44	5.00e-137	481.00
IUUC-Dor-030617	Dipodomys ordii	53.50	2.00e-146	513.00
IUUC-Eca-033420	Equus caballus	52.28	7.00e-137	481.00
IUUC-Eeu-035060	Erinaceus europaeus	59.09	2.00e-63	237.00
IUUC-Fca-035603	Felis catus	51.07	1.00e-139	490.00
IUUC-Fal-037637	Ficedula albicollis	53.20	2.00e-157	549.00
IUUC-Gga-040991	Gallus gallus	51.94	1.00e-151	530.00
IUUC-Ggo-045595	Gorilla gorilla	52.90	6.00e-139	488.00
IUUC-Hsa-046196	Homo sapiens	52.90	5.00e-139	488.00
IUUC-Hvu-047758	Hordeum vulgare	28.87	4.00e-12	67.40
IUUC-Itr-048222	Ictidomys tridecemlineatus	52.49	3.00e-138	486.00
IUUC-Lpe-050995	Leersia perrieri	35.71	2.00e-07	51.20
IUUC-Loc-052778	Lepisosteus oculatus	56.76	6.00e-170	591.00
IUUC-Laf-054474	Loxodonta africana	52.28	7.00e-139	488.00
IUUC-Mcc-055795	Macaca mulatta	52.90	2.00e-138	486.00
IUUC-Mga-059757	Meleagris gallopavo	60.68	2.00e-75	274.00
IUUC-Mmr-061702	Microcebus murinus	52.49	4.00e-138	485.00
IUUC-Mdo-063012	Monodelphis domestica	55.21	8.00e-154	537.00
IUUC-Mmu-064106	Mus musculus	52.87	2.00e-138	486.00
IUUC-Mpu-066147	Mustela putorius furo	47.65	5.00e-126	445.00
IUUC-Mlu-067530	Myotis lucifugus	52.07	2.00e-136	479.00
IUUC-Opr-070222	Ochotona princeps	52.87	4.00e-136	479.00
IUUC-Ont-071367	Oreochromis niloticus	40.38	2.00e-107	383.00
IUUC-Oan-073357	Ornithorhynchus anatinus	56.74	5.00e-133	468.00
IUUC-Ocu-074887	Oryctolagus cuniculus	51.34	1.00e-137	483.00
IUUC-Obr-076376	Oryza brachyantha	37.76	3.00e-08	54.30
IUUC-Ogl-077258	Oryza glaberrima	27.11	2.00e-10	61.60
IUUC-Ogu-078002	Oryza glumaepatula	29.32	2.00e-10	60.80
IUUC-Oin-079689	Oryza indica	27.11	2.00e-10	62.00
IUUC-Oni-082369	Oryza nivara	27.11	2.00e-10	61.60
IUUC-Opu-083230	Oryza punctata	27.11	6.00e-11	63.50
IUUC-Osa-085403	Oryza sativa	27.56	2.00e-10	61.60
IUUC-Ola-087512	Oryzias latipes	42.99	1.00e-44	173.00
IUUC-Oga-088051	Otolemur garnettii	53.11	3.00e-139	489.00
IUUC-Oar-090076	Ovis aries	51.86	4.00e-139	488.00
IUUC-Ptr-091503	Pan troglodytes	52.90	4.00e-139	488.00
IUUC-Pan-092123	Papio anubis	52.90	8.00e-139	488.00
IUUC-Psi-094020	Pelodiscus sinensis	55.71	2.00e-161	563.00
IUUC-Pma-094395	Petromyzon marinus	50.00	1.00e-66	246.00
IUUC-Ppa-095644	Physcomitrella patens	27.27	8.00e-08	51.60
IUUC-Pfo-097023	Poecilia formosa	41.39	1.00e-103	371.00
IUUC-Pab-097532	Pongo abelii	52.90	7.00e-139	488.00
IUUC-Pop-099342	Populus trichocarpa	29.74	3.00e-12	67.00
IUUC-Pca-100255	Procavia capensis	56.52	4.00e-79	289.00
IUUC-Ppe-101268	Prunus persica	26.86	6.00e-11	63.50
IUUC-Pva-102403	Pteropus vampyrus	52.65	3.00e-137	482.00
IUUC-Rno-105329	Rattus norvegicus	52.87	2.00e-137	483.00
IUUC-Sha-106857	Sarcophilus harrisii	55.00	1.00e-151	530.00
IUUC-Sit-110532	Setaria italica	27.88	1.00e-11	65.90
IUUC-Sly-110922	Solanum lycopersicum	26.56	6.00e-10	59.70
IUUC-Sar-113690	Sorex araneus	49.33	1.00e-54	207.00
IUUC-Sbi-114680	Sorghum bicolor	28.35	8.00e-11	63.20
IUUC-Tgu-117058	Taeniopygia guttata	62.39	1.00e-84	306.00
IUUC-Tru-118675	Takifugu rubripes	43.71	3.00e-119	422.00
IUUC-Tsy-119606	Tarsius syrichta	43.13	3.00e-93	336.00
IUUC-Tni-120125	Tetraodon nigroviridis	45.58	6.00e-53	201.00
IUUC-Tae-125287	Triticum aestivum	27.50	2.00e-12	67.80
IUUC-Tur-126862	Triticum urartu	28.87	2.00e-11	65.10
IUUC-Tbe-127727	Tupaia belangeri	46.32	3.00e-131	462.00
IUUC-Ttr-128425	Tursiops truncatus	52.08	2.00e-142	499.00
IUUC-Vpa-130050	Vicugna pacos	52.91	2.00e-129	456.00
IUUC-Vvi-131706	Vitis vinifera	23.81	3.00e-09	57.40
IUUC-Xtr-132178	Xenopus tropicalis	49.85	9.00e-178	617.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence