iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fso-038187

Ensembl Protein ID

NechaP42723

UniProt Accession

C7ZKX0; C7ZKX0_NECH7

Genbank Protein ID

EEU35404.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

GG698941

Gene Name

ERB1; NECHADRAFT_42723

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NechaG42723	NechaT42723	NechaP42723

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-17	60.5	412	443

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+++v+++af +d  +++sG+dDgt++vW l
   Q: 412  GHEGRVRSVAFsPDgEFVASGGDDGTVRVWGL 443
           8***********999***************86 PP

Organism

Fusarium solani

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MAPLITSRKR KGPSEAAPVD DDLAGVQLDG VLSQSEDDSD IDEDEFDALD GLSSDEHVED 60
PDEDEEEEEA HSDDASSELG DSTRALPALD DEDDQPNYRV VKDANGGERY EYAEVDPVYD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCAT TAATAACCTC TCGCAAAAGG AAGGGGCCCT CTGAGGCTGC CCCAGTCGAC 60
GATGATCTTG CTGGCGTTCA ATTAGACGGC GTACTCTCAC AGAGCGAAGA CGACTCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

nhe:NECHADRAFT_42723

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	39.18	1.00e-111	395.00
IUUC-Aml-001507	Ailuropoda melanoleuca	40.76	4.00e-134	470.00
IUUC-Atr-003141	Amborella trichopoda	35.79	7.00e-68	249.00
IUUC-Apl-003545	Anas platyrhynchos	40.03	5.00e-121	426.00
IUUC-Aly-005649	Arabidopsis lyrata	41.60	2.00e-136	477.00
IUUC-Ath-007625	Arabidopsis thaliana	39.77	6.00e-130	456.00
IUUC-Ago-007958	Ashbya gossypii	51.48	0.00e+00	719.00
IUUC-Acl-008344	Aspergillus clavatus	63.96	0.00e+00	832.00
IUUC-Afl-008616	Aspergillus flavus	64.96	0.00e+00	867.00
IUUC-Afu-009083	Aspergillus fumigatus	65.10	0.00e+00	826.00
IUUC-Ani-009365	Aspergillus nidulans	65.10	0.00e+00	853.00
IUUC-Ang-009796	Aspergillus niger	63.73	0.00e+00	848.00
IUUC-Aor-010015	Aspergillus oryzae	64.96	0.00e+00	867.00
IUUC-Ate-010537	Aspergillus terreus	64.66	0.00e+00	873.00
IUUC-Ame-011767	Astyanax mexicanus	47.15	4.00e-69	252.00
IUUC-Bgr-012286	Blumeria graminis	71.54	0.00e+00	989.00
IUUC-Bta-013569	Bos taurus	43.44	8.00e-147	512.00
IUUC-Bci-013820	Botrytis cinerea	74.85	0.00e+00	986.00
IUUC-Bdi-014477	Brachypodium distachyon	41.76	4.00e-138	483.00
IUUC-Bol-016099	Brassica oleracea	41.44	1.00e-136	478.00
IUUC-Bra-017174	Brassica rapa	41.29	4.00e-136	477.00
IUUC-Cel-018201	Caenorhabditis elegans	37.56	6.00e-113	399.00
IUUC-Cja-019009	Callithrix jacchus	42.82	2.00e-90	325.00
IUUC-Cfa-020173	Canis familiaris	39.69	2.00e-131	461.00
IUUC-Cpo-021796	Cavia porcellus	43.13	4.00e-146	509.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	42.18	2.00e-127	447.00
IUUC-Csa-023440	Chlorocebus sabaeus	42.65	2.00e-151	527.00
IUUC-Cin-025782	Ciona intestinalis	41.96	4.00e-150	523.00
IUUC-Csv-026352	Ciona savignyi	41.68	5.00e-146	509.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	75.00	0.00e+00	919.00
IUUC-Cne-027004	Cryptococcus neoformans	49.85	0.00e+00	653.00
IUUC-Cme-027242	Cyanidioschyzon merolae	35.23	8.00e-114	402.00
IUUC-Dre-028658	Danio rerio	43.50	3.00e-154	536.00
IUUC-Dno-028883	Dasypus novemcinctus	43.06	8.00e-148	515.00
IUUC-Dor-031031	Dipodomys ordii	42.95	1.00e-149	521.00
IUUC-Dse-031443	Dothistroma septosporum	60.31	0.00e+00	830.00
IUUC-Dme-031786	Drosophila melanogaster	41.33	3.00e-151	527.00
IUUC-Eca-033677	Equus caballus	44.39	1.00e-147	515.00
IUUC-Eeu-035310	Erinaceus europaeus	40.15	2.00e-110	390.00
IUUC-Fca-035888	Felis catus	42.50	2.00e-148	517.00
IUUC-Fal-037438	Ficedula albicollis	42.96	3.00e-122	430.00
IUUC-Fox-037973	Fusarium oxysporum	88.37	0.00e+00	1312.00
IUUC-Gmo-039114	Gadus morhua	42.68	1.00e-141	494.00
IUUC-Ggr-039746	Gaeumannomyces graminis	71.43	0.00e+00	1063.00
IUUC-Gga-040631	Gallus gallus	40.74	8.00e-79	285.00
IUUC-Gac-042582	Gasterosteus aculeatus	43.65	3.00e-147	513.00
IUUC-Gma-044307	Glycine max	40.99	3.00e-140	490.00
IUUC-Ggo-045587	Gorilla gorilla	42.81	2.00e-151	527.00
IUUC-Hsa-046319	Homo sapiens	42.65	2.00e-151	527.00
IUUC-Hvu-047526	Hordeum vulgare	40.66	3.00e-130	457.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	43.44	4.00e-147	513.00
IUUC-Kpa-049221	Komagataella pastoris	47.67	0.00e+00	651.00
IUUC-Lch-049640	Latimeria chalumnae	42.95	3.00e-161	560.00
IUUC-Lpe-051135	Leersia perrieri	43.17	3.00e-64	238.00
IUUC-Loc-051930	Lepisosteus oculatus	44.71	7.00e-161	558.00
IUUC-Lma-053290	Leptosphaeria maculans	68.25	0.00e+00	911.00
IUUC-Laf-053903	Loxodonta africana	39.69	2.00e-125	441.00
IUUC-Mcc-055471	Macaca mulatta	42.50	9.00e-152	528.00
IUUC-Meu-056190	Macropus eugenii	42.50	2.00e-147	514.00
IUUC-Mor-057135	Magnaporthe oryzae	77.20	0.00e+00	1012.00
IUUC-Mpo-057475	Magnaporthe poae	72.21	0.00e+00	1012.00
IUUC-Mtr-058689	Medicago truncatula	38.66	7.00e-124	436.00
IUUC-Mla-059149	Melampsora laricipopulina	47.48	4.00e-176	609.00
IUUC-Mga-059645	Meleagris gallopavo	35.55	2.00e-43	166.00
IUUC-Mvi-060485	Microbotryum violaceum	44.98	6.00e-150	523.00
IUUC-Mmr-061674	Microcebus murinus	43.64	2.00e-143	500.00
IUUC-Mdo-062973	Monodelphis domestica	42.50	3.00e-152	530.00
IUUC-Mmu-064180	Mus musculus	42.97	2.00e-150	524.00
IUUC-Mac-064535	Musa acuminata	34.34	2.00e-74	272.00
IUUC-Mpu-066406	Mustela putorius furo	43.92	2.00e-152	530.00
IUUC-Mlu-067795	Myotis lucifugus	43.44	8.00e-140	489.00
IUUC-Nfi-068516	Neosartorya fischeri	64.11	0.00e+00	799.00
IUUC-Ncr-068767	Neurospora crassa	75.48	0.00e+00	974.00
IUUC-Opr-071084	Ochotona princeps	42.03	5.00e-59	219.00
IUUC-Ont-071614	Oreochromis niloticus	44.39	1.00e-157	548.00
IUUC-Oba-075980	Oryza barthii	42.54	3.00e-64	237.00
IUUC-Obr-076799	Oryza brachyantha	41.80	1.00e-131	461.00
IUUC-Ogl-077134	Oryza glaberrima	41.71	4.00e-126	443.00
IUUC-Ogu-078655	Oryza glumaepatula	39.34	1.00e-117	415.00
IUUC-Oin-079654	Oryza indica	41.71	3.00e-126	443.00
IUUC-Olo-080706	Oryza longistaminata	43.81	4.00e-65	241.00
IUUC-Ome-081716	Oryza meridionalis	43.49	3.00e-65	241.00
IUUC-Oni-082508	Oryza nivara	38.55	2.00e-111	394.00
IUUC-Opu-083707	Oryza punctata	43.81	7.00e-65	239.00
IUUC-Oru-084453	Oryza rufipogon	43.81	4.00e-65	241.00
IUUC-Osa-085811	Oryza sativa	41.55	7.00e-126	442.00
IUUC-Ola-087361	Oryzias latipes	44.34	4.00e-157	546.00
IUUC-Oga-088015	Otolemur garnettii	42.39	4.00e-151	526.00
IUUC-Oar-090058	Ovis aries	50.90	1.00e-49	189.00
IUUC-Ptr-090631	Pan troglodytes	43.95	3.00e-67	246.00
IUUC-Pan-092306	Papio anubis	42.59	3.00e-150	523.00
IUUC-Pma-094622	Petromyzon marinus	43.49	1.00e-156	545.00
IUUC-Pno-094794	Phaeosphaeria nodorum	63.02	0.00e+00	857.00
IUUC-Ppa-095528	Physcomitrella patens	35.85	1.00e-74	272.00
IUUC-Pfo-096682	Poecilia formosa	42.88	5.00e-158	549.00
IUUC-Pab-097939	Pongo abelii	42.76	1.00e-136	478.00
IUUC-Pop-099043	Populus trichocarpa	42.12	6.00e-125	439.00
IUUC-Pca-100333	Procavia capensis	42.50	6.00e-147	512.00
IUUC-Ppe-102078	Prunus persica	40.94	2.00e-132	464.00
IUUC-Pgr-103525	Puccinia graminis	46.36	3.00e-161	560.00
IUUC-Ptt-103929	Puccinia triticina	46.28	4.00e-156	543.00
IUUC-Pte-104029	Pyrenophora teres	67.37	0.00e+00	943.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	67.31	0.00e+00	949.00
IUUC-Rno-105248	Rattus norvegicus	43.76	7.00e-152	529.00
IUUC-Sce-106381	Saccharomyces cerevisiae	51.17	0.00e+00	715.00
IUUC-Sha-106519	Sarcophilus harrisii	43.19	4.00e-155	539.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	46.56	1.00e-162	564.00
IUUC-Spo-108071	Schizosaccharomyces pombe	45.54	2.00e-156	544.00
IUUC-Smo-109604	Selaginella moellendorffii	40.49	1.00e-120	425.00
IUUC-Sit-110551	Setaria italica	41.89	3.00e-131	460.00
IUUC-Sly-110970	Solanum lycopersicum	41.88	9.00e-67	246.00
IUUC-Stu-112593	Solanum tuberosum	41.44	8.00e-134	469.00
IUUC-Sar-113123	Sorex araneus	48.09	3.00e-60	223.00
IUUC-Sbi-113945	Sorghum bicolor	41.51	1.00e-133	468.00
IUUC-Sre-115188	Sporisorium reilianum	43.94	1.00e-159	555.00
IUUC-Ssc-115352	Sus scrofa	43.17	5.00e-148	516.00
IUUC-Tru-117685	Takifugu rubripes	45.48	5.00e-163	566.00
IUUC-Tni-119982	Tetraodon nigroviridis	43.92	6.00e-155	539.00
IUUC-Tca-121664	Theobroma cacao	40.68	3.00e-134	470.00
IUUC-Tre-122229	Trichoderma reesei	81.04	0.00e+00	1027.00
IUUC-Tvi-122576	Trichoderma virens	83.73	0.00e+00	1056.00
IUUC-Tae-124110	Triticum aestivum	41.04	8.00e-125	439.00
IUUC-Tur-126781	Triticum urartu	38.69	3.00e-107	380.00
IUUC-Tme-127080	Tuber melanosporum	64.00	0.00e+00	863.00
IUUC-Ttr-128514	Tursiops truncatus	40.84	3.00e-91	328.00
IUUC-Uma-129556	Ustilago maydis	43.35	8.00e-156	542.00
IUUC-Vda-129715	Verticillium dahliae	75.36	0.00e+00	1106.00
IUUC-Vvi-131211	Vitis vinifera	40.51	7.00e-125	439.00
IUUC-Xma-133883	Xiphophorus maculatus	42.72	2.00e-153	534.00
IUUC-Yli-134438	Yarrowia lipolytica	50.84	0.00e+00	670.00
IUUC-Zma-135341	Zea mays	37.23	5.00e-122	430.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence