iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tre-122229

Ensembl Protein ID

EGR45347

UniProt Accession

G0RU94; G0RU94_HYPJQ

Genbank Protein ID

EGR45347.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

GL985080

Gene Name

ERB1; TRIREDRAFT_23208

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIREDRAFT_23208	EGR45347	EGR45347

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-16	57.7	363	394

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gH+++v+++af +d   ++sGsdDgt++vW l
   Q: 363  GHASRVRSVAFsPDgEWIASGSDDGTVRVWAL 394
           8***********999***************86 PP

Organism

Trichoderma reesei

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MAPSLRSRKR KEVSEVVESD DDLSGAELEG ILSQSEDDES DAEDDDDDKP NYRVVKDANG 60
GVRYEYEEID PVYDSDDTDA QGPVNTIGNI PLSFYDSYPH IGYDINGKKI MRPATGEALD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTGTCCGTA AGATCGCTTC CAGCGCCATC TGATCCGCTC CCACCGCAAA CCACAAATAT 60
CAGGCATTCT AACCGCTTCA ATGGCTCCGT CACTCCGTTC GCGGAAGCGG AAAGAAGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0070180--F:large ribosomal subunit rRNA binding
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

tre:TRIREDRAFT_23208

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	39.06	1.00e-112	399.00
IUUC-Aml-001507	Ailuropoda melanoleuca	41.37	6.00e-131	459.00
IUUC-Atr-003141	Amborella trichopoda	37.03	2.00e-74	271.00
IUUC-Apl-003545	Anas platyrhynchos	41.55	5.00e-128	449.00
IUUC-Aly-005649	Arabidopsis lyrata	41.50	9.00e-141	492.00
IUUC-Ath-007625	Arabidopsis thaliana	41.50	8.00e-135	472.00
IUUC-Ago-007958	Ashbya gossypii	51.93	0.00e+00	716.00
IUUC-Acl-008344	Aspergillus clavatus	62.92	0.00e+00	788.00
IUUC-Afl-008616	Aspergillus flavus	63.65	0.00e+00	826.00
IUUC-Afu-009083	Aspergillus fumigatus	64.23	0.00e+00	784.00
IUUC-Ani-009365	Aspergillus nidulans	62.83	0.00e+00	808.00
IUUC-Ang-009796	Aspergillus niger	62.45	0.00e+00	805.00
IUUC-Aor-010015	Aspergillus oryzae	63.65	0.00e+00	827.00
IUUC-Ate-010537	Aspergillus terreus	61.95	0.00e+00	816.00
IUUC-Ame-011767	Astyanax mexicanus	51.25	7.00e-69	251.00
IUUC-Bgr-012286	Blumeria graminis	69.54	0.00e+00	919.00
IUUC-Bta-013569	Bos taurus	43.91	5.00e-145	506.00
IUUC-Bci-013820	Botrytis cinerea	72.70	0.00e+00	926.00
IUUC-Bdi-014477	Brachypodium distachyon	40.59	1.00e-136	478.00
IUUC-Bol-016099	Brassica oleracea	41.30	3.00e-139	487.00
IUUC-Bra-017174	Brassica rapa	41.15	2.00e-138	485.00
IUUC-Cel-018201	Caenorhabditis elegans	37.31	3.00e-113	400.00
IUUC-Cja-019009	Callithrix jacchus	44.91	7.00e-89	320.00
IUUC-Cfa-020173	Canis familiaris	39.91	7.00e-132	462.00
IUUC-Cpo-021796	Cavia porcellus	44.25	2.00e-144	504.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	41.22	1.00e-71	262.00
IUUC-Csa-023440	Chlorocebus sabaeus	43.77	1.00e-149	522.00
IUUC-Cin-025782	Ciona intestinalis	43.29	7.00e-152	529.00
IUUC-Csv-026352	Ciona savignyi	41.60	4.00e-145	506.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	69.53	0.00e+00	834.00
IUUC-Cne-027004	Cryptococcus neoformans	47.68	3.00e-179	620.00
IUUC-Cme-027242	Cyanidioschyzon merolae	48.10	1.00e-60	226.00
IUUC-Dre-028658	Danio rerio	44.27	4.00e-156	543.00
IUUC-Dno-028883	Dasypus novemcinctus	43.86	7.00e-146	509.00
IUUC-Dor-031031	Dipodomys ordii	42.99	1.00e-147	515.00
IUUC-Dse-031443	Dothistroma septosporum	59.86	0.00e+00	780.00
IUUC-Dme-031786	Drosophila melanogaster	42.35	2.00e-150	524.00
IUUC-Eca-033677	Equus caballus	44.03	5.00e-145	506.00
IUUC-Eeu-035310	Erinaceus europaeus	40.53	1.00e-109	388.00
IUUC-Fca-035888	Felis catus	42.61	5.00e-146	509.00
IUUC-Fal-037438	Ficedula albicollis	43.77	2.00e-121	427.00
IUUC-Fox-037973	Fusarium oxysporum	81.93	0.00e+00	1123.00
IUUC-Fso-038187	Fusarium solani	81.48	0.00e+00	1113.00
IUUC-Gmo-039114	Gadus morhua	41.42	1.00e-140	491.00
IUUC-Ggr-039746	Gaeumannomyces graminis	72.08	0.00e+00	974.00
IUUC-Gga-040631	Gallus gallus	41.32	5.00e-81	292.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.57	5.00e-143	499.00
IUUC-Gma-044215	Glycine max	40.83	9.00e-143	498.00
IUUC-Ggo-045587	Gorilla gorilla	43.46	1.00e-149	521.00
IUUC-Hsa-046319	Homo sapiens	43.61	1.00e-149	522.00
IUUC-Hvu-047526	Hordeum vulgare	40.99	5.00e-132	463.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	43.23	2.00e-145	507.00
IUUC-Kpa-049221	Komagataella pastoris	49.12	0.00e+00	652.00
IUUC-Lch-049640	Latimeria chalumnae	43.80	7.00e-160	555.00
IUUC-Lpe-051135	Leersia perrieri	41.04	4.00e-68	250.00
IUUC-Loc-051930	Lepisosteus oculatus	43.59	8.00e-159	551.00
IUUC-Lma-053290	Leptosphaeria maculans	65.74	0.00e+00	865.00
IUUC-Laf-053903	Loxodonta africana	39.97	1.00e-123	435.00
IUUC-Mcc-055471	Macaca mulatta	43.61	7.00e-150	522.00
IUUC-Meu-056190	Macropus eugenii	43.39	5.00e-144	503.00
IUUC-Mor-057135	Magnaporthe oryzae	71.64	0.00e+00	941.00
IUUC-Mpo-057475	Magnaporthe poae	71.64	0.00e+00	918.00
IUUC-Mtr-058689	Medicago truncatula	39.04	2.00e-128	451.00
IUUC-Mla-059149	Melampsora laricipopulina	47.17	4.00e-172	596.00
IUUC-Mga-059645	Meleagris gallopavo	35.82	3.00e-44	169.00
IUUC-Mvi-060485	Microbotryum violaceum	46.81	1.00e-154	539.00
IUUC-Mmr-061674	Microcebus murinus	43.55	8.00e-141	492.00
IUUC-Mdo-062973	Monodelphis domestica	43.08	8.00e-150	522.00
IUUC-Mmu-064180	Mus musculus	43.86	3.00e-147	513.00
IUUC-Mac-064535	Musa acuminata	34.86	6.00e-78	283.00
IUUC-Mpu-066406	Mustela putorius furo	43.70	2.00e-149	520.00
IUUC-Mlu-067795	Myotis lucifugus	44.01	4.00e-137	479.00
IUUC-Nfi-068516	Neosartorya fischeri	63.36	0.00e+00	752.00
IUUC-Ncr-068767	Neurospora crassa	71.26	0.00e+00	891.00
IUUC-Opr-071084	Ochotona princeps	48.25	2.00e-61	228.00
IUUC-Ont-071614	Oreochromis niloticus	43.28	2.00e-154	538.00
IUUC-Oba-075980	Oryza barthii	41.33	5.00e-69	253.00
IUUC-Obr-076799	Oryza brachyantha	41.72	5.00e-135	473.00
IUUC-Ogl-077134	Oryza glaberrima	41.88	5.00e-131	459.00
IUUC-Ogu-078655	Oryza glumaepatula	39.69	2.00e-122	431.00
IUUC-Oin-079654	Oryza indica	41.88	7.00e-131	459.00
IUUC-Olo-080706	Oryza longistaminata	41.62	5.00e-69	253.00
IUUC-Ome-081716	Oryza meridionalis	41.33	1.00e-68	253.00
IUUC-Oni-082508	Oryza nivara	38.59	1.00e-116	412.00
IUUC-Opu-083707	Oryza punctata	41.62	6.00e-69	253.00
IUUC-Oru-084453	Oryza rufipogon	41.62	5.00e-69	253.00
IUUC-Osa-085811	Oryza sativa	41.72	1.00e-130	458.00
IUUC-Ola-087361	Oryzias latipes	43.31	9.00e-156	542.00
IUUC-Oga-088015	Otolemur garnettii	42.92	6.00e-149	519.00
IUUC-Oar-090058	Ovis aries	50.30	2.00e-49	188.00
IUUC-Ptr-090631	Pan troglodytes	44.69	4.00e-66	243.00
IUUC-Pan-092306	Papio anubis	43.70	1.00e-148	518.00
IUUC-Pma-094622	Petromyzon marinus	43.39	1.00e-155	541.00
IUUC-Pno-094794	Phaeosphaeria nodorum	60.98	0.00e+00	812.00
IUUC-Ppa-095528	Physcomitrella patens	36.38	1.00e-78	285.00
IUUC-Pfo-096682	Poecilia formosa	41.87	6.00e-156	543.00
IUUC-Pab-097939	Pongo abelii	43.63	1.00e-134	471.00
IUUC-Pop-099530	Populus trichocarpa	42.10	3.00e-126	443.00
IUUC-Pca-100333	Procavia capensis	42.61	1.00e-143	502.00
IUUC-Ppe-102078	Prunus persica	40.03	9.00e-134	469.00
IUUC-Pgr-103525	Puccinia graminis	47.14	6.00e-158	549.00
IUUC-Ptt-103929	Puccinia triticina	47.16	7.00e-154	536.00
IUUC-Pte-104029	Pyrenophora teres	66.52	0.00e+00	904.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	66.52	0.00e+00	903.00
IUUC-Rno-105248	Rattus norvegicus	44.32	2.00e-147	514.00
IUUC-Sce-106381	Saccharomyces cerevisiae	51.83	0.00e+00	713.00
IUUC-Sha-106519	Sarcophilus harrisii	43.86	6.00e-152	529.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	47.05	4.00e-163	566.00
IUUC-Spo-108071	Schizosaccharomyces pombe	44.65	1.00e-158	551.00
IUUC-Smo-109604	Selaginella moellendorffii	39.37	1.00e-119	422.00
IUUC-Sit-109742	Setaria italica	41.74	2.00e-141	494.00
IUUC-Sly-110970	Solanum lycopersicum	42.29	1.00e-69	254.00
IUUC-Stu-112593	Solanum tuberosum	41.65	3.00e-136	477.00
IUUC-Sar-113123	Sorex araneus	50.48	2.00e-59	220.00
IUUC-Sbi-113945	Sorghum bicolor	41.68	3.00e-139	487.00
IUUC-Sre-115188	Sporisorium reilianum	44.94	4.00e-160	556.00
IUUC-Ssc-115352	Sus scrofa	43.94	1.00e-148	518.00
IUUC-Tru-117685	Takifugu rubripes	43.61	1.00e-158	551.00
IUUC-Tni-119982	Tetraodon nigroviridis	47.60	2.00e-85	308.00
IUUC-Tca-121664	Theobroma cacao	40.06	4.00e-135	473.00
IUUC-Tvi-122576	Trichoderma virens	88.99	0.00e+00	1110.00
IUUC-Tae-124110	Triticum aestivum	41.21	4.00e-126	443.00
IUUC-Tur-126781	Triticum urartu	38.74	2.00e-108	384.00
IUUC-Tme-127080	Tuber melanosporum	61.49	0.00e+00	827.00
IUUC-Ttr-128514	Tursiops truncatus	40.65	3.00e-89	320.00
IUUC-Uma-129556	Ustilago maydis	43.93	2.00e-155	541.00
IUUC-Vda-129715	Verticillium dahliae	76.92	0.00e+00	1012.00
IUUC-Vvi-131211	Vitis vinifera	38.98	2.00e-124	437.00
IUUC-Xma-133883	Xiphophorus maculatus	41.87	9.00e-151	525.00
IUUC-Yli-134438	Yarrowia lipolytica	51.68	0.00e+00	653.00
IUUC-Zma-135341	Zea mays	38.14	4.00e-129	453.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence