iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tae-124016

Ensembl Protein ID

TRIAE_CS42_U_TGACv1_642202_AA2113280.1

UniProt Accession

A7L5U6; A7L5U6_WHEAT

Genbank Protein ID

ABS11091.1

Protein Name

PHD zinc finger protein

Genbank Nucleotide ID

EF672268

Gene Name

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIAE_CS42_U_TGACv1_642202_AA2113280	TRIAE_CS42_U_TGACv1_642202_AA2113280.1	TRIAE_CS42_U_TGACv1_642202_AA2113280.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.10e-07	34.6	206	255

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           + C  Cg+++ +++  + C+ C++wfH +C+k++   + +  +++ Cp+C 
   Q: 206  TLCGACGDNYGQDEFWIGCDMCEKWFHGKCVKIT-PAKAEHIKQYKCPSCM 255
           6799******************************.888888888******6 PP

Organism

Triticum aestivum

Protein Sequence
(Fasta)

MDAQYNPRTV EEVFRDYKGR RNGLARALTT DVEEFFRQCD PEKENLCLYG FPNEHWEVNL 60
PAEEVPPELP EPALGINFAR DGMQEKDWLS MVAVHSDAWL LSVAFYFGAR FGFDKSDRKR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCGCCCCTCT TTCCTCTTTT TAAAACTTCC CTAAAAAAAA GATACTACCC CGAAGACGTC 60
AAAATAAAAC ACAAGCACAG TACCCATCCC CTCCGCTCCC CCCTCCCCCT CCGCCTCCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR021998--Alfin
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF12165--Alfin
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding
GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005868	Arabidopsis lyrata	62.90	5.00e-74	271.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence