iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121247

Ensembl Protein ID

EOY29349

UniProt Accession

A0A061GQE0; A0A061GQE0_THECC

Genbank Protein ID

EOY29349.1

Protein Name

TBP-associated factor 5 isoform 1

Genbank Nucleotide ID

CM001887

Gene Name

TCM_036918

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_036918	EOY29349	EOY29349

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-42	140.7	533	571
UBD/Beta-Prp	1.70e-66	225.4	376	690

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH ++v c+++  +++++++Gs D+t+++WD+ +g +++
   Q: 533  GHLSDVDCVQWhaNCNYIATGSSDKTVRLWDVQSGECVR 571
           8***********766*********************986 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl............................lrslsgheaevtavkfspdgkilvtgseDrt 75
           ++l++h+   ++c  +s d+sl+a g+ d+++k+wd+ +                                  l+gh+++v++ +fsp g++++++s D t
   Q: 376  TFLNTHNG--LNCSSISHDGSLVAGGFSDSSLKIWDMAKLGQqagssilqgendstsskhvvgpngvkrsYTLLQGHSGPVYSANFSPLGDFILSSSADTT 474
           55666666..55667777*******************9944499***********************9955555*************************** PP
   S: 76   ikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtlt 176
           i++w+ + +  ++ +kgh++ v++++fsp g++++s+shdrt+r+w +++ q ++ + +gh + v cv++h ++n++++Gs D+tvrlWd+++g+++r + 
   Q: 475  IRLWSTELNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTARIWSMDKIQPMR-IMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRIFI 574
           *******************************************************.********************************************* PP
   S: 177  gghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn............. 264
           g h +++ sl+++++g++++sg++dgt+ +wdl++g+cv  l gh++ v+ ++fs ++ +l+sgs+D ++++Wd+++++ + + + +              
   Q: 575  G-HRSMILSLAMSPDGRYMASGDEDGTIMMWDLSSGRCVTPLMGHSSCVWTLAFSCEGSLLASGSADCTVKLWDVTTSTKVPKNEEKSgnpnrlrslktlp 674
           9.************************************************************************999887766665556666666666666 PP
   S: 265  ssvisvavlsfgdnvl 280
           +++++v  l+f++++l
   Q: 675  TKLTPVYSLRFSRRNL 690
           6666666666665555 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MYPSIKSLVH GEKEEGSREE WRGVTVLAYR EERMDNMQAV NSFVAAYLKK KGFKEAEQLL 60
EDLQNKDSAP IDFHNDPELA KFIYHFSQSE DDVVRYQDGY SKLRSWTYSS LDLYKHELLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTTAGTTAA AATGCGTGCC ATTTTAAACT CTGAAAATCG AGTTTTAAGT CAGTTTCAAA 60
ACAAAGAACA AAACAATCAA ACTGAGTTTA AATCAGTCTC AAAATGGGAA TATCAGCATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000261	Aegilops tauschii	64.74	0.00e+00	723.00
IUUC-Aml-001607	Ailuropoda melanoleuca	44.99	2.00e-95	342.00
IUUC-Atr-003136	Amborella trichopoda	72.22	0.00e+00	962.00
IUUC-Apl-004193	Anas platyrhynchos	44.65	6.00e-94	337.00
IUUC-Aca-004522	Anolis carolinensis	36.90	1.00e-115	409.00
IUUC-Aly-006476	Arabidopsis lyrata	77.06	0.00e+00	1012.00
IUUC-Ath-006587	Arabidopsis thaliana	78.41	0.00e+00	1031.00
IUUC-Ago-007736	Ashbya gossypii	33.81	4.00e-106	378.00
IUUC-Acl-008092	Aspergillus clavatus	38.46	3.00e-73	269.00
IUUC-Afl-008659	Aspergillus flavus	39.04	7.00e-73	267.00
IUUC-Afu-008902	Aspergillus fumigatus	39.10	5.00e-73	268.00
IUUC-Ani-009462	Aspergillus nidulans	30.06	7.00e-75	274.00
IUUC-Aor-010083	Aspergillus oryzae	39.04	7.00e-73	267.00
IUUC-Ate-010271	Aspergillus terreus	39.57	3.00e-71	262.00
IUUC-Ame-010721	Astyanax mexicanus	43.94	5.00e-92	331.00
IUUC-Bgr-012257	Blumeria graminis	29.84	7.00e-81	294.00
IUUC-Bta-013539	Bos taurus	45.03	1.00e-95	343.00
IUUC-Bci-013737	Botrytis cinerea	28.08	7.00e-81	294.00
IUUC-Bdi-015041	Brachypodium distachyon	72.18	0.00e+00	838.00
IUUC-Bol-015483	Brassica oleracea	77.78	0.00e+00	1022.00
IUUC-Bra-017147	Brassica rapa	78.23	0.00e+00	1024.00
IUUC-Cel-018451	Caenorhabditis elegans	35.17	1.00e-56	213.00
IUUC-Cja-018881	Callithrix jacchus	44.73	4.00e-95	342.00
IUUC-Cfa-020056	Canis familiaris	44.99	2.00e-95	343.00
IUUC-Cpo-021454	Cavia porcellus	35.66	2.00e-117	415.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	39.21	3.00e-62	231.00
IUUC-Csa-023045	Chlorocebus sabaeus	44.73	5.00e-95	341.00
IUUC-Cho-024284	Choloepus hoffmanni	48.40	7.00e-79	287.00
IUUC-Cin-025457	Ciona intestinalis	51.15	4.00e-74	270.00
IUUC-Csv-025882	Ciona savignyi	40.05	6.00e-77	281.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	27.75	4.00e-72	265.00
IUUC-Cne-026876	Cryptococcus neoformans	32.15	6.00e-83	301.00
IUUC-Cme-027302	Cyanidioschyzon merolae	35.92	1.00e-111	396.00
IUUC-Dre-027980	Danio rerio	45.85	2.00e-93	336.00
IUUC-Dno-028863	Dasypus novemcinctus	44.73	4.00e-95	341.00
IUUC-Dor-030561	Dipodomys ordii	44.73	3.00e-95	342.00
IUUC-Dse-031547	Dothistroma septosporum	37.71	5.00e-71	261.00
IUUC-Dme-031917	Drosophila melanogaster	43.50	1.00e-79	290.00
IUUC-Ete-032712	Echinops telfairi	40.05	1.00e-73	270.00
IUUC-Eca-033927	Equus caballus	37.08	1.00e-116	413.00
IUUC-Eeu-034449	Erinaceus europaeus	46.48	5.00e-89	321.00
IUUC-Fca-036325	Felis catus	44.99	2.00e-95	342.00
IUUC-Fal-036604	Ficedula albicollis	36.88	2.00e-112	399.00
IUUC-Fox-038049	Fusarium oxysporum	29.75	6.00e-47	181.00
IUUC-Fso-038302	Fusarium solani	35.47	1.00e-51	197.00
IUUC-Gmo-038832	Gadus morhua	42.70	3.00e-90	325.00
IUUC-Ggr-039878	Gaeumannomyces graminis	28.29	4.00e-70	258.00
IUUC-Gga-041147	Gallus gallus	36.70	1.00e-115	410.00
IUUC-Gac-041373	Gasterosteus aculeatus	43.38	3.00e-90	325.00
IUUC-Gma-043230	Glycine max	78.77	0.00e+00	1026.00
IUUC-Ggo-044568	Gorilla gorilla	40.92	2.00e-75	276.00
IUUC-Hsa-045971	Homo sapiens	44.73	3.00e-95	342.00
IUUC-Hvu-047695	Hordeum vulgare	72.60	0.00e+00	665.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	44.47	9.00e-95	340.00
IUUC-Kpa-049402	Komagataella pastoris	34.98	1.00e-115	409.00
IUUC-Lch-049526	Latimeria chalumnae	41.88	8.00e-84	303.00
IUUC-Lpe-051560	Leersia perrieri	67.28	0.00e+00	852.00
IUUC-Loc-052882	Lepisosteus oculatus	43.27	7.00e-91	327.00
IUUC-Lma-053212	Leptosphaeria maculans	31.02	1.00e-77	283.00
IUUC-Laf-053859	Loxodonta africana	44.99	2.00e-95	342.00
IUUC-Mcc-054957	Macaca mulatta	44.73	1.00e-94	339.00
IUUC-Meu-056182	Macropus eugenii	40.87	8.00e-75	273.00
IUUC-Mor-057024	Magnaporthe oryzae	35.42	9.00e-53	201.00
IUUC-Mpo-057520	Magnaporthe poae	28.90	6.00e-69	254.00
IUUC-Mtr-058754	Medicago truncatula	78.18	0.00e+00	1071.00
IUUC-Mla-058881	Melampsora laricipopulina	36.85	5.00e-75	275.00
IUUC-Mga-059776	Meleagris gallopavo	36.70	1.00e-115	409.00
IUUC-Mvi-060208	Microbotryum violaceum	31.20	5.00e-93	335.00
IUUC-Mmr-061783	Microcebus murinus	44.73	1.00e-94	339.00
IUUC-Mdo-062856	Monodelphis domestica	44.76	1.00e-94	340.00
IUUC-Mmu-064218	Mus musculus	44.73	6.00e-95	341.00
IUUC-Mac-064886	Musa acuminata	67.20	8.00e-134	470.00
IUUC-Mpu-065735	Mustela putorius furo	44.99	1.00e-95	343.00
IUUC-Mlu-067544	Myotis lucifugus	44.87	5.00e-94	337.00
IUUC-Nfi-068502	Neosartorya fischeri	39.10	6.00e-74	271.00
IUUC-Ncr-068891	Neurospora crassa	28.94	7.00e-70	258.00
IUUC-Nle-069389	Nomascus leucogenys	44.73	4.00e-95	342.00
IUUC-Opr-071042	Ochotona princeps	41.95	2.00e-81	296.00
IUUC-Ont-071455	Oreochromis niloticus	45.10	5.00e-94	338.00
IUUC-Oan-073181	Ornithorhynchus anatinus	45.03	1.00e-94	339.00
IUUC-Ocu-073758	Oryctolagus cuniculus	37.16	3.00e-116	412.00
IUUC-Oba-075739	Oryza barthii	67.39	0.00e+00	773.00
IUUC-Obr-076111	Oryza brachyantha	71.95	0.00e+00	917.00
IUUC-Ogl-077914	Oryza glaberrima	71.47	0.00e+00	862.00
IUUC-Ogu-078057	Oryza glumaepatula	64.61	0.00e+00	726.00
IUUC-Oin-079473	Oryza indica	72.80	0.00e+00	872.00
IUUC-Olo-080557	Oryza longistaminata	45.08	5.00e-137	480.00
IUUC-Ome-081831	Oryza meridionalis	64.30	0.00e+00	722.00
IUUC-Oni-082441	Oryza nivara	65.07	0.00e+00	729.00
IUUC-Opu-083239	Oryza punctata	59.74	0.00e+00	720.00
IUUC-Oru-085131	Oryza rufipogon	65.22	0.00e+00	731.00
IUUC-Osa-086189	Oryza sativa	72.49	0.00e+00	867.00
IUUC-Ola-086574	Oryzias latipes	45.01	8.00e-92	330.00
IUUC-Olu-087616	Ostreococcus lucimarinus	38.26	3.00e-126	444.00
IUUC-Oga-088827	Otolemur garnettii	44.73	3.00e-95	342.00
IUUC-Oar-089648	Ovis aries	45.03	1.00e-95	343.00
IUUC-Ptr-091195	Pan troglodytes	44.73	5.00e-95	341.00
IUUC-Pan-091978	Papio anubis	44.73	4.00e-95	342.00
IUUC-Psi-093598	Pelodiscus sinensis	36.64	2.00e-104	372.00
IUUC-Pma-094593	Petromyzon marinus	39.49	3.00e-59	222.00
IUUC-Pno-094823	Phaeosphaeria nodorum	32.73	1.00e-81	296.00
IUUC-Ppa-095455	Physcomitrella patens	58.22	0.00e+00	757.00
IUUC-Pfo-097120	Poecilia formosa	46.13	1.00e-93	336.00
IUUC-Pab-098771	Pongo abelii	44.73	4.00e-95	341.00
IUUC-Pop-099542	Populus trichocarpa	80.65	0.00e+00	1100.00
IUUC-Pca-100727	Procavia capensis	41.03	1.00e-74	273.00
IUUC-Ppe-101686	Prunus persica	82.21	0.00e+00	1106.00
IUUC-Pva-103211	Pteropus vampyrus	40.76	2.00e-76	279.00
IUUC-Pgr-103603	Puccinia graminis	31.75	1.00e-84	306.00
IUUC-Ptt-103995	Puccinia triticina	42.14	7.00e-65	241.00
IUUC-Pte-104359	Pyrenophora teres	38.80	6.00e-64	238.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	37.70	9.00e-63	234.00
IUUC-Rno-105064	Rattus norvegicus	44.73	7.00e-95	340.00
IUUC-Sce-106186	Saccharomyces cerevisiae	34.04	3.00e-103	369.00
IUUC-Sha-106582	Sarcophilus harrisii	37.13	2.00e-114	405.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	34.84	6.00e-110	390.00
IUUC-Spo-108142	Schizosaccharomyces pombe	35.86	5.00e-112	397.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	35.44	2.00e-66	246.00
IUUC-Smo-109097	Selaginella moellendorffii	57.91	0.00e+00	721.00
IUUC-Sit-109804	Setaria italica	73.63	0.00e+00	929.00
IUUC-Sly-111693	Solanum lycopersicum	74.78	0.00e+00	1011.00
IUUC-Sar-113381	Sorex araneus	41.58	5.00e-78	284.00
IUUC-Sbi-114849	Sorghum bicolor	73.42	0.00e+00	922.00
IUUC-Sre-114945	Sporisorium reilianum	42.94	6.00e-75	275.00
IUUC-Ssc-115582	Sus scrofa	45.97	9.00e-94	336.00
IUUC-Tgu-116899	Taeniopygia guttata	44.24	5.00e-94	338.00
IUUC-Tru-118011	Takifugu rubripes	43.54	9.00e-93	333.00
IUUC-Tsy-119622	Tarsius syrichta	33.33	1.00e-48	186.00
IUUC-Tni-120598	Tetraodon nigroviridis	42.89	5.00e-92	331.00
IUUC-Tre-121949	Trichoderma reesei	34.34	4.00e-59	221.00
IUUC-Tvi-122626	Trichoderma virens	31.67	1.00e-56	213.00
IUUC-Tae-125816	Triticum aestivum	69.21	0.00e+00	838.00
IUUC-Tur-126005	Triticum urartu	63.79	0.00e+00	775.00
IUUC-Tme-126904	Tuber melanosporum	34.22	2.00e-112	399.00
IUUC-Tbe-127254	Tupaia belangeri	38.30	3.00e-73	268.00
IUUC-Ttr-128544	Tursiops truncatus	45.24	8.00e-96	343.00
IUUC-Uma-129379	Ustilago maydis	44.90	4.00e-74	272.00
IUUC-Vda-129761	Verticillium dahliae	32.29	9.00e-53	201.00
IUUC-Vpa-130485	Vicugna pacos	44.99	2.00e-95	342.00
IUUC-Vvi-131171	Vitis vinifera	81.55	0.00e+00	1101.00
IUUC-Xtr-132762	Xenopus tropicalis	37.96	3.00e-72	265.00
IUUC-Xma-133583	Xiphophorus maculatus	45.56	2.00e-92	332.00
IUUC-Yli-134446	Yarrowia lipolytica	38.94	5.00e-128	451.00
IUUC-Zma-135722	Zea mays	72.10	0.00e+00	923.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence