iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-109494

UUCD1 version

UUC-SeM-01335

Ensembl Protein ID

EFJ11260

UniProt Accession

D8SIS8; D8SIS8_SELML

Genbank Protein ID

EFJ11260.1; EFJ15548.1

Protein Name

Ubiquitin-conjugating enzyme 28; Ubiquitin-conjugating enzyme 28, E2

Genbank Nucleotide ID

GL377648; GL377622

Gene Name

UBC28-2; UBC28-1; SELMODRAFT_228916; SELMODRAFT_449724

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_449724	EFJ11260	EFJ11260

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.10e-56	191.1	5	139
UBD/UBC-like/UBD_UBC	1.70e-74	249.1	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspalsvesv 101
           R+ kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY+ggvF ++i+fp+dYPfkPPkv+f tk+fhPn+++nG++Cl+ilk  e+Wspal++++v
   Q: 5    RILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILK--EQWSPALTISKV 102
           899*********************.9************************************************************9..************ PP
   S: 102  llsiqsllaepnpesplneeaaellkknreeykkkvr 138
           llsi+sll++pnp++pl  e+a+++k++r++y+ ++r
   Q: 103  LLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEGTAR 139
           *********************************9886 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqwsaaltlskvlls 101
           ri kelkdl++d+++ +sa++v +d+f+++ati+gppdspy ggvf +ti++p dypfkppkv+f tk++hpninsngsicldil++qws+alt+skvlls
   Q: 5    RILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLS 105
           899************************************************************************************************** PP
   S: 102  lcslladaepddplvaeiariyktdkekykriarewt 138
           +csll+d++pddplv+eia++yktd+ ky+ +ar wt
   Q: 106  ICSLLTDPNPDDPLVPEIAHMYKTDRAKYEGTARTWT 142
           ************************************8 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MASKRILKEL KDLQKDPPTS CSAGPVAEDM FHWQATIMGP PDSPYAGGVF LVTIHFPPDY 60
PFKPPKVSFR TKVFHPNINS NGSICLDILK EQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTCGCATCA ATCTTTTTAT GGTGCGCGCG TGATTGTGGC GCCGCGCCCC ACGATCCCTG 60
CTCGCGCGCC GCGCTGCCGA CGAATTTCCG GGGAGGGATC GTCTCTCCGG GGGCGCGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

smo:SELMODRAFT_228916; smo:SELMODRAFT_449724

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000292	Aegilops tauschii	95.27	8.00e-83	298.00
IUUC-Bdi-014832	Brachypodium distachyon	95.27	1.00e-82	297.00
IUUC-Ggr-039912	Gaeumannomyces graminis	76.97	9.00e-68	247.00
IUUC-Hvu-047546	Hordeum vulgare	93.92	9.00e-82	294.00
IUUC-Lpe-051692	Leersia perrieri	95.95	5.00e-83	298.00
IUUC-Mpo-057596	Magnaporthe poae	76.32	2.00e-67	246.00
IUUC-Ncr-068677	Neurospora crassa	80.27	8.00e-71	258.00
IUUC-Oba-075251	Oryza barthii	95.95	5.00e-83	298.00
IUUC-Ogu-078338	Oryza glumaepatula	95.95	5.00e-83	298.00
IUUC-Ome-081987	Oryza meridionalis	95.95	5.00e-83	298.00
IUUC-Oni-082631	Oryza nivara	95.95	5.00e-83	298.00
IUUC-Oru-085020	Oryza rufipogon	95.95	5.00e-83	298.00
IUUC-Osa-085982	Oryza sativa	95.95	5.00e-83	298.00
IUUC-Sbi-114749	Sorghum bicolor	95.95	5.00e-83	298.00
IUUC-Tae-122799	Triticum aestivum	95.27	1.00e-82	297.00
IUUC-Tur-126518	Triticum urartu	95.27	1.00e-83	301.00
IUUC-Uma-129648	Ustilago maydis	79.59	5.00e-70	255.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence