iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-015071

Ensembl Protein ID

BRADI1G55090.1

UniProt Accession

I1H2Z1; I1H2Z1_BRADI

Genbank Protein ID

KQK20524.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100825334; BRADI_1g55090

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G55090	BRADI1G55090.1	BRADI1G55090.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.60e-09	37.7	142	190

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           +C  C+ +++ ++ +++Ce+C++wfHp C +++++e +++++ ++C++C+ 
   Q: 142  FC-KCEMPYNPDDLMIQCEECSDWFHPSCIGMTIKEAKKREH-FFCQSCTT 190
           78.7999**************************777777776.******85 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAKTRPPKKI LESYTIKGSD KVIKPGDCVL MRSVDTSKPP YVARIESIEA AGSRGTNVRV 60
RVRWYYRPEE SMGGRRPFHG SKEVFLSDHY DVQSADTIEG KCNVHSFRSY TKLDSVNAED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGAAGA CGCGGCCGCC CAAGAAGATC CTCGAGTCCT ACACCATCAA GGGGTCCGAC 60
AAAGTCATCA AGCGTGAGGC CCTCCCCTCC CCTCAGCCCA GCTCCTCCCT TCTGGTCCAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001025--BAH_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51038--BAH
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01426--BAH
PF00628--PHD

SMART

SM00439--BAH
SM00249--PHD

Gene Ontology

GO:0000785--C:chromatin
GO:0005677--C:chromatin silencing complex
GO:0003682--F:chromatin binding
GO:0000976--F:transcription regulatory region sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0006342--P:chromatin silencing
GO:0031507--P:heterochromatin assembly

KEGG

bdi:100825334

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-022934	Chlamydomonas reinhardtii	47.31	2.00e-47	180.00
IUUC-Gma-043965	Glycine max	67.12	2.00e-89	320.00
IUUC-Hvu-047723	Hordeum vulgare	74.89	2.00e-99	353.00
IUUC-Lpe-051138	Leersia perrieri	91.43	4.00e-116	409.00
IUUC-Mtr-058621	Medicago truncatula	68.33	7.00e-89	318.00
IUUC-Oba-075855	Oryza barthii	92.86	2.00e-117	414.00
IUUC-Obr-076353	Oryza brachyantha	75.59	5.00e-111	394.00
IUUC-Ogl-077547	Oryza glaberrima	89.37	3.00e-110	389.00
IUUC-Ogu-078224	Oryza glumaepatula	75.91	2.00e-97	347.00
IUUC-Oin-079179	Oryza indica	92.69	7.00e-122	428.00
IUUC-Olo-080461	Oryza longistaminata	92.97	8.00e-104	369.00
IUUC-Ome-081714	Oryza meridionalis	92.56	3.00e-118	416.00
IUUC-Oni-082099	Oryza nivara	92.56	3.00e-118	416.00
IUUC-Opu-083906	Oryza punctata	76.36	5.00e-98	349.00
IUUC-Oru-085087	Oryza rufipogon	75.91	7.00e-98	348.00
IUUC-Osa-085620	Oryza sativa	92.69	7.00e-122	428.00
IUUC-Ppa-095639	Physcomitrella patens	64.29	1.00e-75	274.00
IUUC-Pop-098853	Populus trichocarpa	68.95	1.00e-89	321.00
IUUC-Pca-100779	Procavia capensis	30.77	8.00e-11	62.40
IUUC-Ssl-108594	Sclerotinia sclerotiorum	33.33	1.00e-03	39.30
IUUC-Sit-110445	Setaria italica	91.32	4.00e-121	426.00
IUUC-Sly-110932	Solanum lycopersicum	66.21	5.00e-88	316.00
IUUC-Sbi-113989	Sorghum bicolor	91.78	3.00e-121	426.00
IUUC-Sre-115140	Sporisorium reilianum	54.05	7.00e-09	55.80
IUUC-Tre-122041	Trichoderma reesei	29.41	9.00e-04	39.70
IUUC-Tae-123050	Triticum aestivum	94.06	2.00e-123	433.00
IUUC-Uma-129425	Ustilago maydis	44.68	1.00e-06	48.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence