iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Yli-134557

Ensembl Protein ID

CAG81578

UniProt Accession

Q6CDH9; Q6CDH9_YARLI

Genbank Protein ID

CAG81578.1

Protein Name

YALI0C00385p

Genbank Nucleotide ID

CR382129

Gene Name

YALI0_C00385g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
YALI0_C00385g	CAG81578	CAG81578

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-11	41.5	279	307

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 6    vtclaf.sdtllvs.GsdDgtikvWDlrt 32
            t++++ +dt+l++ ++ D  i++WD+r 
   Q: 279  LTAIDWiTDTTLATaCGTDSEIRIWDTRY 307
           689****9977777599*********875 PP

Organism

Yarrowia lipolytica

Protein Sequence
(Fasta)

MSHPLQEFSP SQLNKRRQAS IFDFGATKKR RHEYPPSPPS SSPIKRTDDY TSAEFSTLEK 60
SPVPFEIAVC LPSHLRSGIN SLSHNASFLS RLQWREMDGL RRHIMTQNPI PHRYAQATGI 120

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Nucleotide Sequence
(Fasta)

ATGTCACATC CTCTCCAGGA GTTCTCGCCG TCGCAGCTCA ATAAACGACG TCAGGCGTCC 60
ATCTTCGACT TTGGAGCCAC AAAAAAACGA CGTCACGAAT ATCCTCCTAG CCCGCCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

KEGG

yli:YALI0C00385g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Stu-112346	Solanum tuberosum	27.60	4.00e-12	64.30
IUUC-Tre-121997	Trichoderma reesei	25.58	6.00e-05	40.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence