iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-134919

UUCD1 version

UUC-ZeM-01203

Ensembl Protein ID

Zm00001d040639_T001

UniProt Accession

B6SU83; B6SU83_MAIZE

Genbank Protein ID

ACG28416.1; ONM31706.1

Protein Name

RING-H2 finger protein ATL3F

Genbank Nucleotide ID

EU956298; CM007649

Gene Name

ZEAMMB73_Zm00001d040639

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d040639	Zm00001d040639_T001	Zm00001d040639_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.40e-07	32.3	117	160

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C  +++dg   + lp CgH fha C+ +w     + +++ +CPlCr
   Q: 117  CAVCIAELRDGdeGRALPrCGHRFHAACVDAW-----LRRRHTTCPLCR 160
           ******9944444666777*************.....89999******8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MSGQSSSSYG DTDPGTDRAY STTSSSIRWG PHGRGMTACL VVVNVVLVAL VYLYFWRVFS 60
RRSAASPSAA NPTDHDDDAS STSTPPSPLS SQDQHGRIVA SLPTFVVRSG SGAGAECAVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCGCCACGC GCACTCACCG CTATCTTGAT GATTGTGTCT GTCTCGCTCT CGCTGCTCCG 60
TTCCTGTTCT TCCGCTCCTT CTCCCCACCT CGTTTTGGCT GATCAAAGTT CTTGTTCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bgr-012220	Blumeria graminis	54.90	3.00e-11	62.80
IUUC-Lpe-050993	Leersia perrieri	55.87	9.00e-29	119.00
IUUC-Mor-057236	Magnaporthe oryzae	44.44	3.00e-12	65.90
IUUC-Mpo-057321	Magnaporthe poae	40.40	3.00e-12	66.20
IUUC-Oba-075874	Oryza barthii	54.97	2.00e-24	105.00
IUUC-Ogl-077610	Oryza glaberrima	55.56	2.00e-24	105.00
IUUC-Ogu-078246	Oryza glumaepatula	60.36	7.00e-34	136.00
IUUC-Oin-080103	Oryza indica	55.56	8.00e-25	106.00
IUUC-Ome-081098	Oryza meridionalis	55.56	2.00e-24	106.00
IUUC-Oni-083052	Oryza nivara	55.56	1.00e-24	106.00
IUUC-Osa-086190	Oryza sativa	55.56	2.00e-24	104.00
IUUC-Sit-109869	Setaria italica	65.87	4.00e-37	146.00
IUUC-Sbi-114263	Sorghum bicolor	78.61	4.00e-65	239.00
IUUC-Tre-121885	Trichoderma reesei	43.42	8.00e-12	64.30
IUUC-Tvi-122633	Trichoderma virens	44.00	4.00e-12	65.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence