iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099260

Ensembl Protein ID

POPTR_0012s00640.1

UniProt Accession

B9I294; B9I294_POPTR

Genbank Protein ID

EEE96720.2

Protein Name

TRANSPARENT TESTA GLABRA 1 family protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_569681; POPTR_0012s00640g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s00640	POPTR_0012s00640.1	POPTR_0012s00640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-17	63.7	173	204

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++++Dlr+
   Q: 173  HDKEVHDIAWGEaRVFASVSADGSVRIFDLRD 204
           8899******55689**************987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MENSTQESHL RSENTVTYES PYPLYAMAIS STASRTNQYQ RIALGSFIED YNNRIDIVSF 60
DPETLSIKTH QNLSVEHPYP PTKLMFSPSS LHKSNDLLAS SGDYLRLWEV RDSASVEPLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTCACCTC CACCTTCCTC GAAAATTCTC AAATCTCCAT TCTCAACACC AAAAGAACTC 60
CAATACCATC ATTTAACCTC ATCGCCGAAA CACCCTAACA AAACACAAAA GATCCAATCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

pop:POPTR_0012s00640g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000420	Aegilops tauschii	60.91	2.00e-34	136.00
IUUC-Aly-006211	Arabidopsis lyrata	81.34	9.00e-167	578.00
IUUC-Ath-006884	Arabidopsis thaliana	81.34	3.00e-166	577.00
IUUC-Acl-008299	Aspergillus clavatus	39.82	5.00e-46	178.00
IUUC-Afu-008896	Aspergillus fumigatus	39.12	2.00e-40	160.00
IUUC-Ang-009687	Aspergillus niger	39.64	3.00e-47	182.00
IUUC-Bgr-012055	Blumeria graminis	39.58	4.00e-46	179.00
IUUC-Bdi-014944	Brachypodium distachyon	63.42	7.00e-119	419.00
IUUC-Bol-015620	Brassica oleracea	79.01	7.00e-154	536.00
IUUC-Bra-017045	Brassica rapa	79.01	8.00e-154	535.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	39.22	2.00e-48	186.00
IUUC-Cne-026871	Cryptococcus neoformans	35.14	8.00e-45	174.00
IUUC-Cme-027345	Cyanidioschyzon merolae	38.79	4.00e-58	218.00
IUUC-Gma-043012	Glycine max	78.36	5.00e-156	542.00
IUUC-Hvu-047639	Hordeum vulgare	62.43	1.00e-114	405.00
IUUC-Kpa-049347	Komagataella pastoris	33.42	2.00e-46	179.00
IUUC-Lpe-051336	Leersia perrieri	61.22	1.00e-118	419.00
IUUC-Lma-053005	Leptosphaeria maculans	41.96	9.00e-45	174.00
IUUC-Mtr-058793	Medicago truncatula	80.00	1.00e-160	558.00
IUUC-Mvi-060379	Microbotryum violaceum	39.15	1.00e-44	173.00
IUUC-Mac-065344	Musa acuminata	62.90	9.00e-115	405.00
IUUC-Nfi-068302	Neosartorya fischeri	37.98	1.00e-41	164.00
IUUC-Ncr-068642	Neurospora crassa	39.02	3.00e-46	179.00
IUUC-Oba-075455	Oryza barthii	59.88	1.00e-110	392.00
IUUC-Obr-076064	Oryza brachyantha	61.52	1.00e-112	400.00
IUUC-Ogl-077224	Oryza glaberrima	59.88	1.00e-110	392.00
IUUC-Ogu-078639	Oryza glumaepatula	59.88	8.00e-111	392.00
IUUC-Oin-080194	Oryza indica	59.88	1.00e-110	392.00
IUUC-Olo-080234	Oryza longistaminata	59.59	4.00e-110	390.00
IUUC-Oni-082021	Oryza nivara	59.88	1.00e-110	392.00
IUUC-Opu-083903	Oryza punctata	60.42	8.00e-111	392.00
IUUC-Oru-084738	Oryza rufipogon	59.88	1.00e-110	392.00
IUUC-Osa-085445	Oryza sativa	59.88	1.00e-110	392.00
IUUC-Ppe-101664	Prunus persica	86.01	4.00e-175	606.00
IUUC-Pte-104094	Pyrenophora teres	41.01	1.00e-44	174.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	41.32	8.00e-45	174.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	39.76	8.00e-48	184.00
IUUC-Sly-111838	Solanum lycopersicum	79.88	8.00e-165	572.00
IUUC-Stu-112456	Solanum tuberosum	80.17	4.00e-165	573.00
IUUC-Sbi-113984	Sorghum bicolor	63.55	1.00e-101	362.00
IUUC-Tca-121493	Theobroma cacao	85.47	8.00e-169	585.00
IUUC-Tre-121987	Trichoderma reesei	37.63	2.00e-51	196.00
IUUC-Tvi-122586	Trichoderma virens	37.37	3.00e-50	192.00
IUUC-Tae-125936	Triticum aestivum	62.43	1.00e-114	405.00
IUUC-Tme-126973	Tuber melanosporum	39.59	3.00e-43	169.00
IUUC-Vvi-131483	Vitis vinifera	81.18	2.00e-163	567.00
IUUC-Yli-134419	Yarrowia lipolytica	39.64	6.00e-58	217.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence