iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131483

Ensembl Protein ID

VIT_16s0098g00870.t01

UniProt Accession

Q19N39; Q19N39_VITVI

Genbank Protein ID

ABF66625.2; CCB48097.1

Protein Name

WD-repeat 1

Genbank Nucleotide ID

DQ517913; FN595247

Gene Name

TTG1; WDR1; VIT_16s0098g00870

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_16s0098g00870	VIT_16s0098g00870.t01	VIT_16s0098g00870.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-19	68.0	169	200

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclafsd.tllvsGsdDgtikvWDlrt 32
           H  +v+++a+ + + ++s s Dg+++++Dlr+
   Q: 169  HDKEVYDIAWGEaGVFASVSADGSVRIFDLRD 200
           8899******55799**************987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MERSSQESHL RSENCVTYES PYPLYSMAIS SSTQHHHPRI AIGSFIEELS NRVDIVSFDE 60
DALAIRTHPS LSFDHPYPPT KLMFHPNSRT SPDHLASSGE YLRLWEVRDN SIQPLSVLNN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAATTTCT CACCCGCCAA ACACCACCAG GAAAATGGAG AGATCAAGCC AAGAATCCCA 60
CCTGAGATCT GAAAACTGCG TCACATACGA GTCCCCGTAC CCACTTTACT CCATGGCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG

vvi:100248734

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000420	Aegilops tauschii	60.00	7.00e-35	137.00
IUUC-Aly-006211	Arabidopsis lyrata	76.25	9.00e-158	548.00
IUUC-Ath-006884	Arabidopsis thaliana	75.95	6.00e-157	545.00
IUUC-Acl-008299	Aspergillus clavatus	36.83	1.00e-42	166.00
IUUC-Afl-008470	Aspergillus flavus	35.44	3.00e-38	152.00
IUUC-Afu-008896	Aspergillus fumigatus	37.66	7.00e-39	154.00
IUUC-Ani-009375	Aspergillus nidulans	37.24	3.00e-38	152.00
IUUC-Ang-009687	Aspergillus niger	35.32	3.00e-46	178.00
IUUC-Aor-010198	Aspergillus oryzae	34.91	1.00e-37	150.00
IUUC-Ate-010363	Aspergillus terreus	40.23	1.00e-36	146.00
IUUC-Bgr-012055	Blumeria graminis	40.06	4.00e-43	168.00
IUUC-Bci-013840	Botrytis cinerea	41.08	5.00e-45	174.00
IUUC-Bdi-014944	Brachypodium distachyon	63.69	1.00e-122	432.00
IUUC-Bol-015620	Brassica oleracea	75.95	8.00e-149	518.00
IUUC-Bra-017045	Brassica rapa	75.95	8.00e-149	518.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	36.73	1.00e-44	173.00
IUUC-Cne-026871	Cryptococcus neoformans	34.83	7.00e-45	173.00
IUUC-Cme-027345	Cyanidioschyzon merolae	37.61	3.00e-55	208.00
IUUC-Dse-031207	Dothistroma septosporum	35.01	8.00e-36	144.00
IUUC-Fox-037852	Fusarium oxysporum	36.99	3.00e-47	182.00
IUUC-Fso-038173	Fusarium solani	37.67	6.00e-47	180.00
IUUC-Ggr-040072	Gaeumannomyces graminis	37.00	1.00e-43	170.00
IUUC-Gma-043427	Glycine max	78.11	4.00e-158	549.00
IUUC-Hvu-047639	Hordeum vulgare	62.99	2.00e-118	417.00
IUUC-Lpe-051336	Leersia perrieri	63.24	1.00e-123	435.00
IUUC-Lma-053005	Leptosphaeria maculans	39.62	5.00e-42	165.00
IUUC-Mor-057075	Magnaporthe oryzae	35.50	1.00e-41	163.00
IUUC-Mpo-057336	Magnaporthe poae	36.36	4.00e-45	174.00
IUUC-Mtr-058793	Medicago truncatula	78.65	7.00e-165	572.00
IUUC-Mvi-060379	Microbotryum violaceum	38.08	4.00e-42	165.00
IUUC-Mac-065344	Musa acuminata	62.97	8.00e-117	412.00
IUUC-Nfi-068302	Neosartorya fischeri	36.61	2.00e-39	155.00
IUUC-Ncr-068642	Neurospora crassa	40.74	6.00e-45	174.00
IUUC-Oba-075455	Oryza barthii	64.39	3.00e-117	414.00
IUUC-Obr-076064	Oryza brachyantha	64.41	1.00e-120	425.00
IUUC-Ogl-077224	Oryza glaberrima	64.39	3.00e-117	414.00
IUUC-Ogu-078639	Oryza glumaepatula	64.09	2.00e-116	410.00
IUUC-Oin-080194	Oryza indica	64.39	4.00e-117	413.00
IUUC-Olo-080234	Oryza longistaminata	64.09	1.00e-116	412.00
IUUC-Oni-082021	Oryza nivara	64.39	4.00e-117	413.00
IUUC-Opu-083903	Oryza punctata	64.97	3.00e-117	414.00
IUUC-Oru-084738	Oryza rufipogon	64.39	3.00e-117	414.00
IUUC-Osa-085445	Oryza sativa	64.39	3.00e-117	414.00
IUUC-Pno-094967	Phaeosphaeria nodorum	39.62	2.00e-42	166.00
IUUC-Pop-099260	Populus trichocarpa	81.18	2.00e-163	567.00
IUUC-Ppe-101664	Prunus persica	82.75	8.00e-171	591.00
IUUC-Pva-102938	Pteropus vampyrus	53.36	2.00e-58	218.00
IUUC-Pte-104094	Pyrenophora teres	40.26	2.00e-42	166.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	39.94	4.00e-42	165.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	38.59	7.00e-50	190.00
IUUC-Spo-108014	Schizosaccharomyces pombe	33.25	1.00e-47	182.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	40.76	5.00e-45	174.00
IUUC-Sly-111838	Solanum lycopersicum	81.58	2.00e-166	577.00
IUUC-Stu-112456	Solanum tuberosum	80.99	3.00e-165	573.00
IUUC-Sbi-113984	Sorghum bicolor	61.56	1.00e-103	368.00
IUUC-Sre-114968	Sporisorium reilianum	36.63	2.00e-53	202.00
IUUC-Tca-121493	Theobroma cacao	79.59	2.00e-165	574.00
IUUC-Tre-121987	Trichoderma reesei	37.11	1.00e-47	183.00
IUUC-Tvi-122586	Trichoderma virens	37.11	5.00e-47	181.00
IUUC-Tae-125936	Triticum aestivum	62.99	3.00e-118	417.00
IUUC-Tme-126973	Tuber melanosporum	38.89	2.00e-40	159.00
IUUC-Uma-129362	Ustilago maydis	36.34	3.00e-53	202.00
IUUC-Vda-130025	Verticillium dahliae	38.46	3.00e-43	168.00
IUUC-Yli-134419	Yarrowia lipolytica	40.84	2.00e-60	225.00
IUUC-Zma-135276	Zea mays	63.80	3.00e-120	424.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence