iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099367

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin carrier protein 4

Genbank Nucleotide ID

CM000338

Gene Name

POPTRDRAFT_755305; POPTR_0002s16240g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0002s16240	POPTR_0002s16240.1	POPTR_0002s16240.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	5.90e-33	114.7	11	140

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 8    elekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyen.GkvClsilkeeekWspals 97
           +l+k  ++ +++++ ++  ++e+ v + Gp+++pY+ggv+++++e+p+ YP+k+P++ f++ki+hPnv+e  G+vCl++++  ++Wsp+ +
   Q: 11   DLMKLMMSDYKVELIND-GMQEFYVHFNGPNESPYHGGVWRIRVELPDAYPYKSPSIGFVNKIYHPNVDEMsGSVCLDVIN--QTWSPMFD 98
           5667778889999***9.8***************************************************99********9..******** PP
   S: 98   vesvl.lsiqsllaepnpesplneeaaellkknreeykkkvr 138
           + +v+ + + +ll  pnp++pln eaa l+ +++ +y+++v+
   Q: 99   LVNVFeVFLPQLLLYPNPSDPLNGEAAALMMRDKPAYEQRVE 140
           *****889********************************97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSSPSKRREM DLMKLMMSDY KVELINDGMQ EFYVHFNGPN ESPYHGGVWR IRVELPDAYP 60
YKSPSIGFVN KIYHPNVDEM SGSVCLDVIN QTWSPMFDLV NVFEVFLPQL LLYPNPSDPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGTCGTTGC TTCTTCCAGT TGTACAAGCA AAACCATAAC CATAGCCTTC TCTTCTTCCG 60
CTCTCTCTCT CTCCCTCTTT TGATTAAAAT ATATATATCT TTGAAACAGT AATTAAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0002s16240g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002681	Amborella trichopoda	86.34	2.00e-83	300.00
IUUC-Ago-007727	Ashbya gossypii	61.33	3.00e-54	204.00
IUUC-Acl-008119	Aspergillus clavatus	64.33	4.00e-65	239.00
IUUC-Afl-008412	Aspergillus flavus	65.62	4.00e-50	189.00
IUUC-Afu-008925	Aspergillus fumigatus	60.56	2.00e-60	224.00
IUUC-Ani-009294	Aspergillus nidulans	60.00	2.00e-60	224.00
IUUC-Ang-009805	Aspergillus niger	67.48	5.00e-65	239.00
IUUC-Aor-010201	Aspergillus oryzae	61.21	3.00e-56	210.00
IUUC-Ate-010441	Aspergillus terreus	61.90	5.00e-52	196.00
IUUC-Cre-022956	Chlamydomonas reinhardtii	65.93	7.00e-68	249.00
IUUC-Cne-027006	Cryptococcus neoformans	69.40	4.00e-58	216.00
IUUC-Gma-044100	Glycine max	90.71	5.00e-89	319.00
IUUC-Hvu-047260	Hordeum vulgare	87.84	4.00e-78	283.00
IUUC-Mtr-058579	Medicago truncatula	93.55	8.00e-87	311.00
IUUC-Mla-058926	Melampsora laricipopulina	72.79	9.00e-66	241.00
IUUC-Nfi-068618	Neosartorya fischeri	67.57	6.00e-59	219.00
IUUC-Ncr-068712	Neurospora crassa	71.67	6.00e-55	205.00
IUUC-Ppe-101420	Prunus persica	90.22	8.00e-87	311.00
IUUC-Pgr-103325	Puccinia graminis	72.79	1.00e-60	224.00
IUUC-Pte-104024	Pyrenophora teres	57.35	4.00e-63	233.00
IUUC-Pyt-104715	Pyrenophora triticirepentis	64.46	2.00e-60	224.00
IUUC-Sit-109856	Setaria italica	86.34	6.00e-84	302.00
IUUC-Sly-111361	Solanum lycopersicum	87.43	3.00e-95	339.00
IUUC-Stu-112455	Solanum tuberosum	88.59	2.00e-95	340.00
IUUC-Sbi-113911	Sorghum bicolor	86.34	2.00e-83	300.00
IUUC-Sre-115027	Sporisorium reilianum	70.32	3.00e-67	246.00
IUUC-Tca-121070	Theobroma cacao	94.87	3.00e-87	313.00
IUUC-Tre-122110	Trichoderma reesei	70.23	1.00e-56	211.00
IUUC-Uma-129334	Ustilago maydis	70.32	3.00e-67	246.00
IUUC-Vvi-131712	Vitis vinifera	92.35	1.00e-91	328.00
IUUC-Yli-134339	Yarrowia lipolytica	69.68	3.00e-66	243.00
IUUC-Zma-135623	Zea mays	88.46	3.00e-83	300.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence