iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Zma-135429

UUCD1 version

UUC-ZeM-00109

Ensembl Protein ID

Zm00001d033621_T001

UniProt Accession

A0A1D6L0I7; A0A1D6L0I7_MAIZE

Genbank Protein ID

ONM08079.1

Protein Name

LysM domain containing protein

Genbank Nucleotide ID

CM007647

Gene Name

ZEAMMB73_Zm00001d033621

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d033621	Zm00001d033621_T001	Zm00001d033621_T001

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	6.60e-07	31.5	15	76

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 81   aaapapapaptptpeegpdaglldrlpeeilveilklldkeellraarvcrrwqelasqkalwkt 145
           a+ pa  p+p p p      g+  rlp ++l  +l++l++ +l r a+vcr w+ +as++a++++
   Q: 15   ASLPADPPSPVPDPAA---GGMDARLPSDLLRAVLQRLPPIDLARSACVCRAWRAVASDRAVVEA 76
           3334444444444444...46889*******************************9998888765 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MDSRVVDGAG GGADASLPAD PPSPVPDPAA GGMDARLPSD LLRAVLQRLP PIDLARSACV 60
CRAWRAVASD RAVVEAAFCA PWGVRRVVGE PATGAFWRAA SLGRFALSHA IRRGDTVPGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTCCGATC TCCCATTTCC TCACAACCTC ACCCGGCTCC ATCCACGCGG CTCCAACGCC 60
AGCCACAGCA CGAGCCATGG ACTCGCGCGT CGTGGACGGC GCAGGTGGGG GTGCCGACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR018392--LysM_dom

PROSITE

PS50181--FBOX

Pfam

PF00646--F-box
PF01476--LysM

SMART

SM00256--FBOX

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000141	Aegilops tauschii	50.00	1.00e-04	40.40
IUUC-Bta-012928	Bos taurus	52.78	2.00e-03	38.10
IUUC-Ogu-078768	Oryza glumaepatula	42.50	8.00e-05	41.20
IUUC-Ome-081824	Oryza meridionalis	53.49	5.00e-06	45.40
IUUC-Oni-082058	Oryza nivara	42.50	1.00e-04	40.40
IUUC-Opu-083827	Oryza punctata	45.61	5.00e-06	45.40
IUUC-Osa-085943	Oryza sativa	51.16	7.00e-06	43.10
IUUC-Ppa-095311	Physcomitrella patens	50.45	5.00e-64	238.00
IUUC-Sit-110253	Setaria italica	90.34	2.00e-101	361.00
IUUC-Sbi-113988	Sorghum bicolor	95.41	2.00e-122	431.00
IUUC-Tre-122147	Trichoderma reesei	38.89	5.70e-02	32.70
IUUC-Tae-125020	Triticum aestivum	78.10	7.00e-104	369.00
IUUC-Tme-127182	Tuber melanosporum	31.82	1.00e-03	36.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence