iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Cel-018496

Ensembl Protein ID

D2013.3

UniProt Accession

Q18963; Q18963_CAEEL

Genbank Protein ID

CAA87775.1

Protein Name

Cockayne Syndrome complementation group A homolog

Genbank Nucleotide ID

BX284602

Gene Name

D2013.3; csa-1; CELE_D2013.3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
WBGene00008403	D2013.3	D2013.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA	RAID2
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-07	31.9	190	216

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 9    laf..sd.tllvsGsdDgtikvWDlrt 32
           +++  s  ++l +G +Dgti ++D+r+
   Q: 190  VQWypSKhHYLYAGRRDGTIGLFDIRS 216
           7999644799**************886 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MTVRHEEYMF SCDLKKRRVF EEQQVSRALL NFRWTKHIPM GCDQTGKGHQ EDISAIDIDD 60
GDQMLLFGSH SGSVSVAKYK YLDRKKWKKP MTLKLAKQSL KTIKWCPIDL RLFMVTTASN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCGTAATATA TTTATTCGCA TGTTTCTATA ATTTCTCAAC AGGAAAATGA CTGTTCGTCA 60
CGAGGAGTAC ATGTTCAGCT GTGATTTGAA GTGAGTTTTG CGGTTTTTAT GTGAATTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

SMART

SM00320--WD40

KEGG

cel:CELE_D2013.3

Orthology

iUUCD ID

Species

Identity

E-value

Score

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence