iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.3__1637__AT3G15070.1	fgenesh2_kg.3__1637__AT3G15070.1	fgenesh2_kg.3__1637__AT3G15070.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-06	28.9	419	460

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC+e +  +d   +l+C H +ha+Cl+kw         +  CP+C+
   Q: 419  CTICQENYknQDKIATLDCMHKYHAECLEKW------LVIKNVCPICK 460
           ********66334889***************......999999****6 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MEQNSQSFVA HLEPCIGTNY LYPDIPPVNT VPHLEAHSLQ EPYDNNSMFY GPPQYHHQHS 60
SNLGSGMPTA PNFYVPYVNH EAPPSYLLSH GSHGAVVGVT STEHERNAHF MDHGYKRKSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACGAGTTGG TTGTTTTGAT GCTAGCAAGG TCAGGAACTT AATAATAAAT CTTCTCTACG 60
TCTTTCTGAA ATTTTCTGGT TTTTTATGTT TTGTGAATTG GGTTTGATCT GATTTTTGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_478936

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001082	Aegilops tauschii	44.96	2.00e-32	132.00
IUUC-Ath-007411	Arabidopsis thaliana	90.97	0.00e+00	855.00
IUUC-Bdi-015025	Brachypodium distachyon	44.68	7.00e-35	141.00
IUUC-Bol-015103	Brassica oleracea	65.43	2.00e-134	471.00
IUUC-Bra-018051	Brassica rapa	60.00	1.00e-135	475.00
IUUC-Csv-026249	Ciona savignyi	40.00	8.00e-11	58.90
IUUC-Kpa-049341	Komagataella pastoris	47.46	4.00e-12	65.50
IUUC-Mtr-058077	Medicago truncatula	44.05	9.00e-35	140.00
IUUC-Obr-076274	Oryza brachyantha	34.77	2.00e-37	149.00
IUUC-Ppe-101426	Prunus persica	39.20	5.00e-81	294.00
IUUC-Pgr-103373	Puccinia graminis	28.86	1.00e-09	56.20
IUUC-Sit-110729	Setaria italica	45.95	7.00e-35	140.00
IUUC-Tur-126399	Triticum urartu	44.19	1.00e-31	130.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence