iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110010

Ensembl Protein ID

Si011652m

UniProt Accession

K3YBQ8; K3YBQ8_SETIT

Genbank Protein ID

KQK98622.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM003534

Gene Name

SETIT_011652mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si011652m.g	Si011652m	Si011652m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-22	79.0	442	512

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawcee 71
           vp++flCp++ +++++Pv++++G+t++r +I +wl++g +tcP+t+q+l + ++   n +l+rli+ w +e
   Q: 442  VPSDFLCPLTRQIFNNPVTIETGQTFERHAIVQWLDRGFRTCPFTGQELLSLSIpDTNRVLKRLIDGWKSE 512
           8************************************************99999899***********876 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MAPPPSSSLL RDLLVADGFK NRRRSSDGSA PASSRAASMP LNNRRPGKPA RSQSDVIARS 60
RLREMNGGDR DAAGDERRAA TATRRLSASQ TSARSYSNKG DSDSGGAGGR RGTAASASAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCCGC CGCCGTCGTC GTCCTTGCTC CGCGACCTGC TCGTAGCTGA CGGCTTCAAG 60
AACCGTCGCA GGTCGTCTGA CGGCTCGGCA CCGGCGTCCT CGAGAGCCGC GAGCATGCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	38.63	2.00e-40	160.00
IUUC-Bdi-014999	Brachypodium distachyon	60.58	0.00e+00	882.00
IUUC-Gma-044073	Glycine max	27.52	3.00e-52	200.00
IUUC-Hvu-047722	Hordeum vulgare	54.32	4.00e-148	518.00
IUUC-Lpe-051567	Leersia perrieri	57.81	0.00e+00	640.00
IUUC-Mtr-058670	Medicago truncatula	42.54	1.00e-34	141.00
IUUC-Mac-065130	Musa acuminata	40.10	4.00e-38	152.00
IUUC-Oba-075449	Oryza barthii	62.37	0.00e+00	917.00
IUUC-Obr-076588	Oryza brachyantha	59.17	0.00e+00	650.00
IUUC-Ogu-078984	Oryza glumaepatula	61.35	0.00e+00	900.00
IUUC-Olo-080563	Oryza longistaminata	64.38	0.00e+00	762.00
IUUC-Ome-081747	Oryza meridionalis	62.30	0.00e+00	954.00
IUUC-Oni-082227	Oryza nivara	61.94	0.00e+00	905.00
IUUC-Opu-083803	Oryza punctata	61.86	0.00e+00	710.00
IUUC-Oru-084717	Oryza rufipogon	61.94	0.00e+00	911.00
IUUC-Osa-085390	Oryza sativa	63.07	0.00e+00	704.00
IUUC-Pop-099189	Populus trichocarpa	43.88	8.00e-46	178.00
IUUC-Ppe-101493	Prunus persica	37.40	1.00e-68	254.00
IUUC-Sce-106286	Saccharomyces cerevisiae	31.17	2.90e-01	28.50
IUUC-Stu-112239	Solanum tuberosum	38.75	4.00e-40	158.00
IUUC-Sbi-113947	Sorghum bicolor	73.52	0.00e+00	1092.00
IUUC-Tca-121435	Theobroma cacao	34.43	3.00e-74	273.00
IUUC-Tae-125606	Triticum aestivum	56.03	2.00e-164	572.00
IUUC-Tur-126526	Triticum urartu	63.78	1.00e-66	246.00
IUUC-Vvi-130964	Vitis vinifera	44.32	6.00e-42	165.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence