iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131729

UUCD1 version

UUC-ViV-00761

Ensembl Protein ID

VIT_13s0019g04710.t01

UniProt Accession

F6HND8; F6HND8_VITVI

Genbank Protein ID

CCB56157.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN595998

Gene Name

ATPUB14; VIT_13s0019g04710

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_13s0019g04710	VIT_13s0019g04710.t01	VIT_13s0019g04710.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.60e-34	118.4	248	320

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelMrdPv++++G+ty+rs+I+kwl+ g+ktcP+t+q+l ++ l+Pn++l++li  wce+n++
   Q: 248  IPDDFRCPISLELMRDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCESNGI 320
           89********************************************************************987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSPTKDSNKI SVLNQLLAVV KEISGLPECR NTTKKMYYNL VRRVKLLSPL FEELKDSEEE 60
LEDSEIRAFE LLRVALDSAM DLLKLVNEGS KLYQALQRDK IADKFCQMTD QIEASLSSIP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGCTGCTTC TTCTTCTTTC TTTGTTCGTA CATCCATGGC CGATTGAAAA TTTTCATTTC 60
CTACGCTTCC CATCCTTAAT CCTAGTACCG AAAACCCATA AAAATTCAAT CGTTTCCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100265038

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002932	Amborella trichopoda	72.09	0.00e+00	862.00
IUUC-Aly-006103	Arabidopsis lyrata	68.29	0.00e+00	795.00
IUUC-Ath-006994	Arabidopsis thaliana	67.97	0.00e+00	790.00
IUUC-Bdi-014691	Brachypodium distachyon	67.35	0.00e+00	733.00
IUUC-Bol-016160	Brassica oleracea	65.53	0.00e+00	768.00
IUUC-Bra-016727	Brassica rapa	65.40	0.00e+00	776.00
IUUC-Gma-043496	Glycine max	76.65	0.00e+00	944.00
IUUC-Hvu-047272	Hordeum vulgare	65.84	0.00e+00	695.00
IUUC-Lpe-051517	Leersia perrieri	66.67	0.00e+00	700.00
IUUC-Mtr-057651	Medicago truncatula	77.07	0.00e+00	893.00
IUUC-Mac-065604	Musa acuminata	60.73	0.00e+00	660.00
IUUC-Oba-075750	Oryza barthii	65.73	0.00e+00	714.00
IUUC-Obr-076793	Oryza brachyantha	66.35	0.00e+00	689.00
IUUC-Ogl-077380	Oryza glaberrima	65.92	0.00e+00	716.00
IUUC-Ogu-078219	Oryza glumaepatula	61.69	0.00e+00	714.00
IUUC-Oin-079724	Oryza indica	61.86	0.00e+00	731.00
IUUC-Ome-081932	Oryza meridionalis	61.86	0.00e+00	716.00
IUUC-Oni-082439	Oryza nivara	65.92	0.00e+00	714.00
IUUC-Opu-083837	Oryza punctata	62.02	0.00e+00	734.00
IUUC-Oru-085172	Oryza rufipogon	61.69	0.00e+00	714.00
IUUC-Osa-085991	Oryza sativa	65.73	0.00e+00	714.00
IUUC-Pop-099229	Populus trichocarpa	77.19	0.00e+00	937.00
IUUC-Ppe-101965	Prunus persica	73.52	0.00e+00	880.00
IUUC-Smo-109443	Selaginella moellendorffii	55.77	7.00e-170	589.00
IUUC-Sit-110461	Setaria italica	68.23	0.00e+00	676.00
IUUC-Sly-111662	Solanum lycopersicum	76.86	0.00e+00	925.00
IUUC-Stu-111979	Solanum tuberosum	76.86	0.00e+00	925.00
IUUC-Sbi-114550	Sorghum bicolor	62.48	0.00e+00	714.00
IUUC-Tca-121269	Theobroma cacao	79.21	0.00e+00	958.00
IUUC-Tae-124061	Triticum aestivum	65.99	0.00e+00	705.00
IUUC-Tur-126276	Triticum urartu	63.57	0.00e+00	659.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence