iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051102

Ensembl Protein ID

LPERR05G00330.1

UniProt Accession

A0A0D9WBT1; A0A0D9WBT1_9ORYZ

Protein Name

Eukaryotic translation initiation factor 3 subunit F; eIF-3-epsilon

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR05G00330	LPERR05G00330.1	LPERR05G00330.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	40.00	9.00e-46	181.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Leersia perrieri

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAAAAEGSVL LFPSTSSASA RVEAVVVFNI CDSYVRRPDQ AERVIGTLLG SVLPDGTVHV 60
RNSYVVPHGE SADQVALDIE YHHNMYASHH KVNPKEVIVG WFSTGFGISG GSTLIHDFYS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCTG CTGCGGAGGG CTCGGTGCTC CTGTTCCCCT CCACCTCGTC GGCGTCGGCG 60
CGTGTGGAGG CGGTCGTCGT CTTCAACATC TGCGACAGCT ACGTGCGCCG CCCCGACCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0005852--C:eukaryotic translation initiation factor 3 complex
GO:0016020--C:membrane
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0009793--P:embryo development ending in seed dormancy
GO:0001731--P:formation of translation preinitiation complex
GO:0009846--P:pollen germination
GO:0006446--P:regulation of translational initiation
GO:0009744--P:response to sucrose

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	79.15	5.00e-128	450.00
IUUC-Aml-001527	Ailuropoda melanoleuca	39.25	5.00e-55	207.00
IUUC-Atr-002686	Amborella trichopoda	70.67	2.00e-107	380.00
IUUC-Apl-003977	Anas platyrhynchos	37.56	1.00e-45	175.00
IUUC-Aca-004335	Anolis carolinensis	38.87	2.00e-56	211.00
IUUC-Aly-005945	Arabidopsis lyrata	68.60	4.00e-112	396.00
IUUC-Ath-007045	Arabidopsis thaliana	67.92	2.00e-110	390.00
IUUC-Acl-008365	Aspergillus clavatus	34.97	2.00e-44	172.00
IUUC-Afl-008742	Aspergillus flavus	34.62	3.00e-42	165.00
IUUC-Afu-009030	Aspergillus fumigatus	34.75	3.00e-44	171.00
IUUC-Ani-009212	Aspergillus nidulans	34.60	6.00e-43	167.00
IUUC-Ang-009712	Aspergillus niger	34.97	1.00e-43	169.00
IUUC-Aor-009885	Aspergillus oryzae	35.66	4.00e-43	167.00
IUUC-Ate-010315	Aspergillus terreus	34.75	2.00e-42	165.00
IUUC-Ame-010801	Astyanax mexicanus	50.60	2.00e-19	88.60
IUUC-Bgr-011982	Blumeria graminis	33.57	4.00e-41	160.00
IUUC-Bta-012804	Bos taurus	38.35	3.00e-55	208.00
IUUC-Bci-013891	Botrytis cinerea	32.42	3.00e-35	141.00
IUUC-Bdi-014328	Brachypodium distachyon	84.48	1.00e-129	454.00
IUUC-Bol-015446	Brassica oleracea	69.28	4.00e-116	410.00
IUUC-Bra-016862	Brassica rapa	68.60	9.00e-115	405.00
IUUC-Cel-018171	Caenorhabditis elegans	27.46	2.00e-26	112.00
IUUC-Cja-019335	Callithrix jacchus	39.25	7.00e-55	207.00
IUUC-Cfa-020138	Canis familiaris	38.87	1.00e-54	205.00
IUUC-Cpo-022109	Cavia porcellus	36.76	1.00e-45	176.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	42.81	1.00e-64	239.00
IUUC-Csa-023994	Chlorocebus sabaeus	39.25	7.00e-55	206.00
IUUC-Cho-024351	Choloepus hoffmanni	30.19	2.00e-31	129.00
IUUC-Cin-025801	Ciona intestinalis	38.64	4.00e-52	197.00
IUUC-Csv-025805	Ciona savignyi	39.02	3.00e-52	197.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	28.33	6.00e-32	130.00
IUUC-Cne-026868	Cryptococcus neoformans	28.17	8.00e-22	96.70
IUUC-Cme-027328	Cyanidioschyzon merolae	26.32	3.00e-19	88.20
IUUC-Dre-028085	Danio rerio	39.16	2.00e-54	204.00
IUUC-Dno-030099	Dasypus novemcinctus	39.25	8.00e-55	206.00
IUUC-Dor-030324	Dipodomys ordii	35.09	2.00e-45	175.00
IUUC-Dse-031314	Dothistroma septosporum	34.28	3.00e-44	171.00
IUUC-Dme-031926	Drosophila melanogaster	36.86	2.00e-50	191.00
IUUC-Ete-032569	Echinops telfairi	38.93	3.00e-51	194.00
IUUC-Eca-033502	Equus caballus	37.64	1.00e-49	189.00
IUUC-Eeu-034883	Erinaceus europaeus	31.87	8.00e-25	105.00
IUUC-Fca-035873	Felis catus	39.25	6.00e-55	207.00
IUUC-Fal-036921	Ficedula albicollis	39.92	4.00e-56	210.00
IUUC-Fox-037765	Fusarium oxysporum	29.77	1.00e-27	116.00
IUUC-Fso-038240	Fusarium solani	29.69	2.00e-28	119.00
IUUC-Gmo-038864	Gadus morhua	38.49	7.00e-56	209.00
IUUC-Ggr-039862	Gaeumannomyces graminis	29.39	2.00e-28	119.00
IUUC-Gga-040952	Gallus gallus	39.92	5.00e-56	210.00
IUUC-Gac-041677	Gasterosteus aculeatus	41.18	5.00e-60	223.00
IUUC-Gma-043061	Glycine max	72.92	2.00e-108	384.00
IUUC-Ggo-045591	Gorilla gorilla	39.25	5.00e-55	207.00
IUUC-Hsa-046860	Homo sapiens	39.25	7.00e-55	206.00
IUUC-Hvu-047410	Hordeum vulgare	86.49	3.00e-75	272.00
IUUC-Itr-048211	Ictidomys tridecemlineatus	39.62	2.00e-55	209.00
IUUC-Lch-049410	Latimeria chalumnae	37.44	5.00e-34	136.00
IUUC-Loc-052016	Lepisosteus oculatus	36.88	7.00e-46	176.00
IUUC-Lma-053157	Leptosphaeria maculans	33.57	9.00e-44	169.00
IUUC-Laf-054568	Loxodonta africana	39.25	1.00e-54	206.00
IUUC-Mcc-054613	Macaca mulatta	39.25	5.00e-55	207.00
IUUC-Meu-056832	Macropus eugenii	22.01	2.00e-16	77.80
IUUC-Mor-057104	Magnaporthe oryzae	30.47	1.00e-30	126.00
IUUC-Mtr-058445	Medicago truncatula	76.32	1.00e-124	438.00
IUUC-Mla-059038	Melampsora laricipopulina	30.58	1.00e-33	136.00
IUUC-Mga-059548	Meleagris gallopavo	38.33	4.00e-48	184.00
IUUC-Mvi-060520	Microbotryum violaceum	25.25	6.00e-19	87.40
IUUC-Mdo-062376	Monodelphis domestica	38.11	2.00e-54	205.00
IUUC-Mmu-063254	Mus musculus	39.62	1.00e-55	209.00
IUUC-Mac-065635	Musa acuminata	70.99	6.00e-114	402.00
IUUC-Mpu-066314	Mustela putorius furo	39.25	5.00e-55	207.00
IUUC-Mlu-067512	Myotis lucifugus	39.54	2.00e-55	208.00
IUUC-Nfi-068262	Neosartorya fischeri	34.75	3.00e-44	171.00
IUUC-Ncr-068872	Neurospora crassa	30.42	9.00e-32	130.00
IUUC-Nle-070118	Nomascus leucogenys	39.25	6.00e-55	207.00
IUUC-Opr-071228	Ochotona princeps	37.55	2.00e-47	181.00
IUUC-Ont-072600	Oreochromis niloticus	39.16	4.00e-58	217.00
IUUC-Oan-073584	Ornithorhynchus anatinus	37.89	1.00e-47	182.00
IUUC-Ocu-074542	Oryctolagus cuniculus	39.25	2.00e-55	208.00
IUUC-Oba-075923	Oryza barthii	96.47	9.00e-151	525.00
IUUC-Obr-076313	Oryza brachyantha	97.17	4.00e-143	499.00
IUUC-Ogl-076932	Oryza glaberrima	96.47	9.00e-151	525.00
IUUC-Ogu-078152	Oryza glumaepatula	96.47	9.00e-151	525.00
IUUC-Oin-079528	Oryza indica	96.47	9.00e-151	525.00
IUUC-Olo-080401	Oryza longistaminata	96.47	9.00e-151	525.00
IUUC-Ome-081553	Oryza meridionalis	96.11	2.00e-150	523.00
IUUC-Oni-082090	Oryza nivara	96.47	1.00e-150	525.00
IUUC-Opu-083583	Oryza punctata	95.76	4.00e-141	493.00
IUUC-Oru-084492	Oryza rufipogon	96.47	9.00e-151	525.00
IUUC-Osa-085383	Oryza sativa	96.47	9.00e-151	525.00
IUUC-Ola-086835	Oryzias latipes	38.52	4.00e-58	217.00
IUUC-Olu-087716	Ostreococcus lucimarinus	35.21	2.00e-40	158.00
IUUC-Oga-088886	Otolemur garnettii	38.87	5.00e-55	207.00
IUUC-Oar-090079	Ovis aries	38.35	2.00e-55	208.00
IUUC-Ptr-091457	Pan troglodytes	39.25	7.00e-55	206.00
IUUC-Pan-092317	Papio anubis	33.70	1.00e-30	125.00
IUUC-Psi-093129	Pelodiscus sinensis	36.58	2.00e-49	188.00
IUUC-Pma-094488	Petromyzon marinus	40.30	3.00e-59	221.00
IUUC-Pno-095049	Phaeosphaeria nodorum	33.92	2.00e-45	175.00
IUUC-Ppa-095341	Physcomitrella patens	58.42	3.00e-102	363.00
IUUC-Pfo-096286	Poecilia formosa	38.27	3.00e-58	217.00
IUUC-Pab-097765	Pongo abelii	39.25	7.00e-55	206.00
IUUC-Pop-099131	Populus trichocarpa	73.52	7.00e-121	426.00
IUUC-Pca-100524	Procavia capensis	30.53	2.00e-30	124.00
IUUC-Ppe-101934	Prunus persica	74.04	2.00e-126	444.00
IUUC-Pva-102577	Pteropus vampyrus	39.92	2.00e-55	209.00
IUUC-Pgr-103521	Puccinia graminis	29.68	2.00e-33	135.00
IUUC-Pte-104304	Pyrenophora teres	33.92	2.00e-45	175.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	33.92	5.00e-45	174.00
IUUC-Rno-105717	Rattus norvegicus	39.62	1.00e-55	209.00
IUUC-Sha-107190	Sarcophilus harrisii	38.31	1.00e-53	202.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	33.70	4.00e-40	157.00
IUUC-Spo-108355	Schizosaccharomyces pombe	33.33	5.00e-40	157.00
IUUC-Smo-109374	Selaginella moellendorffii	61.09	6.00e-105	372.00
IUUC-Sit-110119	Setaria italica	91.32	4.00e-136	476.00
IUUC-Sly-111570	Solanum lycopersicum	71.48	6.00e-107	379.00
IUUC-Stu-112308	Solanum tuberosum	72.89	9.00e-117	412.00
IUUC-Sar-113515	Sorex araneus	36.84	2.00e-14	71.60
IUUC-Sbi-114605	Sorghum bicolor	86.55	2.00e-135	474.00
IUUC-Sre-114906	Sporisorium reilianum	34.86	2.00e-41	161.00
IUUC-Tgu-117087	Taeniopygia guttata	37.89	7.00e-48	182.00
IUUC-Tru-117700	Takifugu rubripes	38.95	4.00e-60	224.00
IUUC-Tni-120470	Tetraodon nigroviridis	39.54	7.00e-58	216.00
IUUC-Tca-121109	Theobroma cacao	75.79	8.00e-115	405.00
IUUC-Tre-122095	Trichoderma reesei	30.36	2.00e-28	119.00
IUUC-Tvi-122580	Trichoderma virens	30.00	1.00e-27	116.00
IUUC-Tae-125129	Triticum aestivum	85.66	7.00e-135	472.00
IUUC-Tur-126658	Triticum urartu	76.95	2.00e-119	421.00
IUUC-Tme-127043	Tuber melanosporum	34.88	3.00e-43	168.00
IUUC-Tbe-127927	Tupaia belangeri	39.25	6.00e-55	207.00
IUUC-Ttr-129231	Tursiops truncatus	39.25	4.00e-55	207.00
IUUC-Uma-129578	Ustilago maydis	34.86	1.00e-40	159.00
IUUC-Vda-129730	Verticillium dahliae	29.35	3.00e-31	128.00
IUUC-Vpa-130677	Vicugna pacos	45.95	1.10e-02	33.50
IUUC-Vvi-130968	Vitis vinifera	74.20	9.00e-121	425.00
IUUC-Xtr-132203	Xenopus tropicalis	39.16	5.00e-53	200.00
IUUC-Xma-133972	Xiphophorus maculatus	38.78	2.00e-57	215.00
IUUC-Yli-134553	Yarrowia lipolytica	31.87	1.00e-32	132.00
IUUC-Zma-134941	Zea mays	87.92	5.00e-123	432.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence