iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099300

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000349

Gene Name

POPTRDRAFT_242198; POPTR_0013s07100g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0013s07100	POPTR_0013s07100.1	POPTR_0013s07100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.90e-08	34.0	139	181

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f   + +++lp C H+fh+ C+  w       + +++CPlCr
   Q: 139  CSVCLSEFqeNESLRLLPkCSHAFHLPCIDTW------LKSHASCPLCR 181
           ********6544499999**************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSTTGNQNP WAPYSTYRDC SQGICSIYCP QRCYIIFPPP PPFTLGDDDS NTDLSPLIIA 60
VIGILASAFI LVTYYTLISK YCRRRGQGDG ATDLNENHDQ MASEAWQGIP AGGLDEALVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCTCGTTT TCATACTTCT TTTTCTAATC CCACTTGCTT TTCCCCTTCC AGCTCCCCTC 60
TCTTTTCTTT TTCAGTCACA AGGTTTGTTT GTAAATATTC TGATGAAAGC ATATCATGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0013s07100g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bol-015947	Brassica oleracea	42.93	5.00e-54	204.00
IUUC-Bra-017128	Brassica rapa	44.93	9.00e-68	249.00
IUUC-Ont-071771	Oreochromis niloticus	41.38	3.00e-15	75.50
IUUC-Ppa-095182	Physcomitrella patens	40.49	1.00e-30	127.00
IUUC-Ppe-101180	Prunus persica	52.47	9.00e-85	306.00
IUUC-Sly-111604	Solanum lycopersicum	47.23	1.00e-61	229.00
IUUC-Stu-112707	Solanum tuberosum	47.23	1.00e-63	235.00
IUUC-Tca-120979	Theobroma cacao	56.88	6.00e-101	360.00
IUUC-Tur-126697	Triticum urartu	68.24	3.00e-32	131.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence