iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Atr-002604

Ensembl Protein ID

ERN06524

UniProt Accession

W1PFN1; W1PFN1_AMBTC

Genbank Protein ID

ERN06524.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KI393888

Gene Name

AMTR_s00058p00096230

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AMTR_s00058p00096230	ERN06524	ERN06524

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.20e-10	40.9	93	124

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           H d   c+++  + +  +sG+ D++++ WD+r
   Q: 93   HDDLAICVEYsKEtCQAISGGLDNKLRFWDTR 124
           7777889999844589**************87 PP

Organism

Amborella trichopoda

Protein Sequence
(Fasta)

MEKGSSKLQR PPNDAISRVR FAPESNNLLV SSWDCTLSLY DANNSCLRNR FSSGFPILDC 60
CFESETVALS VGSDCFVHRY DFHMGNESTL GNHDDLAICV EYSKETCQAI SGGLDNKLRF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGAAGG GCTCTTCAAA GTTGCAGAGA CCCCCAAATG ATGCCATTTC TAGGGTTCGA 60
TTTGCACCAG AATCCAACAA TCTCCTCGTC TCTTCTTGGG ATTGTGTACG TTCCTCCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001094	Aegilops tauschii	43.60	2.00e-66	244.00
IUUC-Bol-016156	Brassica oleracea	49.20	5.00e-87	313.00
IUUC-Bra-017094	Brassica rapa	48.52	9.00e-82	295.00
IUUC-Gma-043687	Glycine max	49.68	1.00e-89	322.00
IUUC-Lpe-051057	Leersia perrieri	45.51	1.00e-73	268.00
IUUC-Mtr-058179	Medicago truncatula	47.32	3.00e-83	300.00
IUUC-Mac-064581	Musa acuminata	48.14	4.00e-87	313.00
IUUC-Ome-081933	Oryza meridionalis	37.27	9.00e-65	239.00
IUUC-Pop-099762	Populus trichocarpa	47.71	1.00e-80	291.00
IUUC-Stu-112000	Solanum tuberosum	48.65	8.00e-87	312.00
IUUC-Tca-121403	Theobroma cacao	52.49	2.00e-85	308.00
IUUC-Tur-126104	Triticum urartu	44.98	8.00e-72	262.00
IUUC-Vvi-131179	Vitis vinifera	51.66	4.00e-92	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence