iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114333

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G123900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g020080	Sb07g020080.1	Sb07g020080.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-11	43.4	314	346

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d +++++Gs D t+++WD+r
   Q: 314  GHLDYSFASAWhPDgNIVATGSQDTTCRLWDIR 346
           799999999***999****************87 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDEFELEDNL EFILQSIQEL MEDQGDNNAF GDANQNELFA SLVSYDQENM LPDVSAADVA 60
AGKDMQGIPW EKMLFGRDKY REMKMKNYRN YQNLSYARED ALQECKHVEK DSPYYDFHYN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTCTCCCAC CCCACCCCAC CCCCGTGCTG CCTGCGCTTT TGCCAGCGCG CGCCCCACCA 60
CCACCCCGAA AAGAAATTCC CCCAATTCCG CTCCATCCCG CGCGCATCCG GATCCGCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

sbi:SORBI_07g020080

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000214	Aegilops tauschii	84.33	1.00e-142	498.00
IUUC-Bdi-014366	Brachypodium distachyon	85.36	0.00e+00	812.00
IUUC-Hvu-047437	Hordeum vulgare	81.85	6.00e-150	522.00
IUUC-Lpe-051685	Leersia perrieri	80.33	0.00e+00	716.00
IUUC-Oba-075469	Oryza barthii	83.88	0.00e+00	769.00
IUUC-Obr-076922	Oryza brachyantha	84.91	0.00e+00	786.00
IUUC-Ogu-077978	Oryza glumaepatula	83.88	0.00e+00	769.00
IUUC-Oin-079628	Oryza indica	70.00	2.00e-179	620.00
IUUC-Olo-080502	Oryza longistaminata	83.88	0.00e+00	768.00
IUUC-Oni-082262	Oryza nivara	83.41	0.00e+00	765.00
IUUC-Opu-083138	Oryza punctata	83.45	0.00e+00	763.00
IUUC-Oru-084351	Oryza rufipogon	83.88	0.00e+00	769.00
IUUC-Osa-085692	Oryza sativa	85.07	0.00e+00	775.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	33.78	1.00e-52	199.00
IUUC-Sit-110785	Setaria italica	95.50	0.00e+00	870.00
IUUC-Tae-123077	Triticum aestivum	82.96	0.00e+00	807.00
IUUC-Tur-126142	Triticum urartu	83.76	2.00e-142	498.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence