iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bol-016529

Ensembl Protein ID

Bo5g121250.1

UniProt Accession

A0A0D3CJ31; A0A0D3CJ31_BRAOL

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bo5g121250	Bo5g121250.1	Bo5g121250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.20e-31	106.2	436	468
UBD/Beta-Prp	2.20e-54	186.2	5	215

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H+++++cla+ ++  ++++Gs D  + v+++++
   Q: 436  HSARINCLAWsPNsSMVATGSLDTCVIVYEVDK 468
           99*********777***************9876 PP

UBD/Beta-Prp

   S: 55   vtavkfspdgkilvtgseD....rtikvwdlstgkcvhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvh 146
           + ++++s dg +++ +s D     +++ +  ++g+ v  + gh+++vls++f p++  ++v+ ++d  ++ ++ +  +      ++h+ +vncv+++
   Q: 5    IDDLQWSADG-MRIVASGDgkgkSLVRAFMWDSGSNVGEFDGHSRRVLSCAFKPTRpFRIVTCGEDFLVNFYEGPPFKFKL-SSREHSNFVNCVRYS 99
           7789999999.7777888879999******************************99899*******************999.9************** PP
   S: 147  pdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngkelvsgsldgtvklwdlq.....tgecvrtlnghtdnvksvrfs..pnd 234
           pdg+ +++ s D++  ++d kt + l +l  +  h++s+y +s++++gke++++s d++ k+w+++     t ++  t+ g +  v ++ +    ++
   Q: 100  PDGSKFITVSSDKKGVIYDGKTCEKLGELssEDVHKGSIYAVSWSPDGKEVLTVSADKSAKVWEISdsgngTLKTTLTCPGSSGGVDDMLVGclWQN 196
           *****************************88777*********************************996655556677777777777665444588 PP
   S: 235  erlvsgssDgsiriW...d 250
           +++v++s  g+i+i+   d
   Q: 197  DHIVTVSLGGTISIFsasD 215
           8999*********984444 PP

Organism

Brassica oleracea

Protein Sequence
(Fasta)

LAGRIDDLQW SADGMRIVAS GDGKGKSLVR AFMWDSGSNV GEFDGHSRRV LSCAFKPTRP 60
FRIVTCGEDF LVNFYEGPPF KFKLSSREHS NFVNCVRYSP DGSKFITVSS DKKGVIYDGK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGGCTGGGA GGATCGATGA TCTCCAGTGG TCGGCTGATG GGATGCGGAT CGTTGCTTCT 60
GGTGATGGCA AAGGAAAGTC TCTAGTTCGT GCTTTCATGT GAGTAGTAAA ACACTGTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	68.34	0.00e+00	721.00
IUUC-Aly-006465	Arabidopsis lyrata	91.21	0.00e+00	951.00
IUUC-Ath-006740	Arabidopsis thaliana	91.02	0.00e+00	951.00
IUUC-Bra-017139	Brassica rapa	98.83	0.00e+00	1014.00
IUUC-Csv-025986	Ciona savignyi	31.06	5.00e-61	228.00
IUUC-Oan-073594	Ornithorhynchus anatinus	29.82	3.00e-28	118.00
IUUC-Pca-100257	Procavia capensis	55.00	2.00e-23	103.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence