iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0007s13010	POPTR_0007s13010.2	POPTR_0007s13010.2
POPTR_0007s13010	POPTR_0007s13010.1	POPTR_0007s13010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.30e-29	102.4	271	342

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +peef+CpIs+ +M dPvv++sG+t++r  I+kw+++g+ tcP+t+ +lt++ l+Pn+ +++li++wc + +
   Q: 271  PPEEFKCPISMRVMYDPVVIASGQTFERMWIQKWFDEGNDTCPKTKVKLTHRALTPNTCIKDLISKWCVKYG 342
           79******************************************************************9865 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGTDAAEAVE TLPCPYSFKV HHSMCTELLK LVDKVSKIFP KIEAARPCCS LGIQALCSLN 60
NALEKAKHHL QYCCDSSKLY LAITGDVVVS RCQRSRNLME QSLGQIQTMV PVILAAEISH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTTTATCTT GTGGTAAAAA CTGGGTTGCC CCGAGAATCT AACTATTTAT AACCCCTCAA 60
GGTTCAAAAG CTTTCTTTTT CTTTCTTCAC CGGTAATTAT ATTGTCTTTC TTTGCGGGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

pop:POPTR_0007s13010g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000166	Aegilops tauschii	36.69	6.00e-133	468.00
IUUC-Aly-005788	Arabidopsis lyrata	42.63	3.00e-136	478.00
IUUC-Bdi-014593	Brachypodium distachyon	37.26	2.00e-130	459.00
IUUC-Bol-016241	Brassica oleracea	43.23	3.00e-132	465.00
IUUC-Bra-018043	Brassica rapa	42.20	4.00e-138	484.00
IUUC-Gma-043011	Glycine max	50.63	0.00e+00	671.00
IUUC-Hvu-047756	Hordeum vulgare	36.99	5.00e-133	468.00
IUUC-Mvi-060489	Microbotryum violaceum	39.53	6.00e-03	34.70
IUUC-Mac-064841	Musa acuminata	40.57	2.00e-143	502.00
IUUC-Oba-075842	Oryza barthii	38.30	1.00e-126	446.00
IUUC-Obr-076217	Oryza brachyantha	38.89	5.00e-130	457.00
IUUC-Ogl-077921	Oryza glaberrima	38.19	8.00e-127	447.00
IUUC-Ogu-078199	Oryza glumaepatula	38.11	4.00e-127	448.00
IUUC-Oin-079116	Oryza indica	38.19	1.00e-126	446.00
IUUC-Olo-080352	Oryza longistaminata	38.98	7.00e-122	431.00
IUUC-Ome-081110	Oryza meridionalis	38.44	1.00e-128	453.00
IUUC-Oni-082415	Oryza nivara	38.30	6.00e-126	444.00
IUUC-Opu-083658	Oryza punctata	39.46	1.00e-126	446.00
IUUC-Oru-084974	Oryza rufipogon	38.44	1.00e-128	453.00
IUUC-Osa-086052	Oryza sativa	38.31	3.00e-127	448.00
IUUC-Sly-111406	Solanum lycopersicum	45.92	8.00e-167	580.00
IUUC-Stu-112174	Solanum tuberosum	46.05	3.00e-176	611.00
IUUC-Tae-123767	Triticum aestivum	36.69	1.00e-133	469.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence