iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Dre-028120

Ensembl Protein ID

ENSDARP00000088806.4

UniProt Accession

E7FAG6; L0N9K3; E7FAG6_DANRE

Genbank Protein ID

CCE04070.1

Protein Name

Activating molecule in beclin-1-regulated autophagy; Autophagy/beclin-1 regulator 1a

Genbank Nucleotide ID

CABZ01117708

Gene Name

ambra1a

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000008322.10	ENSDART00000098033.5	ENSDARP00000088806.4
ENSDARG00000008322.10	ENSDART00000173466.1	ENSDARP00000142964.1
ENSDARG00000008322.10	ENSDART00000173744.1	ENSDARP00000142694.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-07	31.2	92	125

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sdtllvsGsdDgtikvWDlr 31
           gH    +cl f    + +l++sG+ Dg +++WDl+
   Q: 92   GHRRTPWCLTFhpiiP-GLIASGCLDGEVRIWDLH 125
           5777779999999988.9***************97 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MKLGQRNSVC ILSSRERGAP GLASYRVLQQ LVEEKTQRMK WQSQKVELPD SPRSTFLLAF 60
SPDRSLMAST HVNHNIYITE VKSGKCVHSL VGHRRTPWCL TFHPIIPGLI ASGCLDGEVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGACAGATCA ACCTGATTGG CTGGCTCATG AACGATGTTT TCGGTAATTG ATTATGAAGG 60
ATCTGTGCTC TACTGGCTTT GTCTGGACTC GTTTTGGCAG GACACACACA GCAACAAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043231--C:intracellular membrane-bounded organelle
GO:0006914--P:autophagy
GO:0043009--P:chordate embryonic development
GO:0007626--P:locomotory behavior
GO:0048741--P:skeletal muscle fiber development

KEGG

dre:100332642

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014580	Brachypodium distachyon	38.65	3.00e-28	120.00
IUUC-Hvu-047536	Hordeum vulgare	39.26	6.00e-29	122.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	51.85	3.00e-176	612.00
IUUC-Mtr-058484	Medicago truncatula	37.57	6.00e-29	122.00
IUUC-Opr-070360	Ochotona princeps	70.02	2.00e-171	596.00
IUUC-Oan-073623	Ornithorhynchus anatinus	62.00	0.00e+00	1063.00
IUUC-Ppa-095832	Physcomitrella patens	35.64	2.00e-27	118.00
IUUC-Pop-099742	Populus trichocarpa	38.33	1.00e-28	122.00
IUUC-Pca-101035	Procavia capensis	49.64	2.00e-163	570.00
IUUC-Sit-110786	Setaria italica	38.65	4.00e-30	127.00
IUUC-Sly-111631	Solanum lycopersicum	35.92	2.00e-29	124.00
IUUC-Stu-112031	Solanum tuberosum	38.35	2.00e-29	124.00
IUUC-Tae-123681	Triticum aestivum	38.65	5.00e-28	118.00
IUUC-Tur-126480	Triticum urartu	38.65	4.00e-28	120.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence