iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-037483

Ensembl Protein ID

ENSFALP00000006528.1

UniProt Accession

U3JUS4; U3JUS4_FICAL

Genbank Protein ID

ENSFALP00000006528

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01000953

Gene Name

AMBRA1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000006252.1	ENSFALT00000006557.1	ENSFALP00000006528.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-07	31.7	93	126

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlr 31
           gH    +c+ f ++  +l++sG+ Dg +++WDl+
   Q: 93   GHRRTPWCVTFhPTipGLIASGCLDGEVRIWDLH 126
           6777779*****66679***************97 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MKVVPEKNAV RILWGRERGT QALGAQRLLQ ELVEDKTRWM KWEGKKVELP DSPRSTFLLA 60
FSPDRTLMAS THVNHNIYIT EVKTGKCVHS LVGHRRTPWC VTFHPTIPGL IASGCLDGEV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTAAAGTTTT TACTTCATCT GGGTGATCAA AGTAAAAGCT GCCTTCCTTA TCAGTCTCTT 60
ATCTTTTTAG GTTTCCATGA AGATAAACAA CTGAAATGTG GATAGCTTAT TTGTAGCTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Gene Ontology

GO:0005930--C:axoneme
GO:0005829--C:cytosol
GO:0005739--C:mitochondrion
GO:0045335--C:phagocytic vesicle
GO:0006914--P:autophagy
GO:0008285--P:negative regulation of cell proliferation
GO:0043524--P:negative regulation of neuron apoptotic process
GO:0021915--P:neural tube development
GO:0098779--P:positive regulation of macromitophagy in response to mitochondrial depolarization
GO:0043552--P:positive regulation of phosphatidylinositol 3-kinase activity
GO:2000785--P:regulation of autophagosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001917	Ailuropoda melanoleuca	84.43	0.00e+00	1580.00
IUUC-Atr-002557	Amborella trichopoda	37.04	3.00e-30	127.00
IUUC-Apl-004186	Anas platyrhynchos	96.16	0.00e+00	2305.00
IUUC-Aca-004419	Anolis carolinensis	82.55	0.00e+00	1963.00
IUUC-Aly-006308	Arabidopsis lyrata	37.16	3.00e-28	120.00
IUUC-Ath-007656	Arabidopsis thaliana	35.29	5.00e-28	119.00
IUUC-Ame-011354	Astyanax mexicanus	59.09	0.00e+00	1323.00
IUUC-Bta-012455	Bos taurus	81.97	0.00e+00	1961.00
IUUC-Bdi-014580	Brachypodium distachyon	39.66	9.00e-30	125.00
IUUC-Bol-016094	Brassica oleracea	38.22	2.00e-28	120.00
IUUC-Bra-017308	Brassica rapa	39.67	2.00e-29	124.00
IUUC-Cja-019073	Callithrix jacchus	92.61	1.00e-145	509.00
IUUC-Cfa-020994	Canis familiaris	83.85	0.00e+00	1320.00
IUUC-Cpo-022101	Cavia porcellus	84.11	0.00e+00	1905.00
IUUC-Csa-023273	Chlorocebus sabaeus	80.43	0.00e+00	1372.00
IUUC-Cin-025567	Ciona intestinalis	53.88	2.00e-57	216.00
IUUC-Csv-026005	Ciona savignyi	47.60	1.00e-56	212.00
IUUC-Dre-028282	Danio rerio	60.51	0.00e+00	1327.00
IUUC-Dno-029948	Dasypus novemcinctus	81.83	0.00e+00	1910.00
IUUC-Dor-030568	Dipodomys ordii	80.14	0.00e+00	1045.00
IUUC-Ete-032864	Echinops telfairi	79.48	0.00e+00	1014.00
IUUC-Eca-034392	Equus caballus	80.04	0.00e+00	1369.00
IUUC-Eeu-034440	Erinaceus europaeus	73.12	0.00e+00	1049.00
IUUC-Fca-035359	Felis catus	80.90	0.00e+00	1890.00
IUUC-Gmo-039343	Gadus morhua	76.04	0.00e+00	789.00
IUUC-Gga-040787	Gallus gallus	97.94	0.00e+00	1483.00
IUUC-Gac-041321	Gasterosteus aculeatus	64.10	0.00e+00	1407.00
IUUC-Gma-044022	Glycine max	34.98	2.00e-30	127.00
IUUC-Ggo-044775	Gorilla gorilla	83.97	0.00e+00	949.00
IUUC-Hsa-045708	Homo sapiens	81.64	0.00e+00	1954.00
IUUC-Hvu-047536	Hordeum vulgare	40.11	6.00e-31	129.00
IUUC-Itr-048376	Ictidomys tridecemlineatus	79.52	0.00e+00	1043.00
IUUC-Lch-050255	Latimeria chalumnae	71.80	0.00e+00	1446.00
IUUC-Lpe-050684	Leersia perrieri	40.33	8.00e-32	132.00
IUUC-Loc-052881	Lepisosteus oculatus	68.71	0.00e+00	1543.00
IUUC-Laf-053342	Loxodonta africana	81.64	0.00e+00	676.00
IUUC-Mcc-055848	Macaca mulatta	79.92	0.00e+00	1921.00
IUUC-Meu-056320	Macropus eugenii	82.67	0.00e+00	1083.00
IUUC-Mtr-058484	Medicago truncatula	36.59	4.00e-30	126.00
IUUC-Mga-059401	Meleagris gallopavo	97.89	0.00e+00	1927.00
IUUC-Mmr-061037	Microcebus murinus	83.65	0.00e+00	1907.00
IUUC-Mdo-062484	Monodelphis domestica	73.63	0.00e+00	1700.00
IUUC-Mmu-064090	Mus musculus	81.14	0.00e+00	1912.00
IUUC-Mac-065308	Musa acuminata	39.89	9.00e-30	125.00
IUUC-Mpu-066165	Mustela putorius furo	81.18	0.00e+00	1332.00
IUUC-Mlu-068038	Myotis lucifugus	81.29	0.00e+00	1945.00
IUUC-Nle-069361	Nomascus leucogenys	85.10	0.00e+00	1741.00
IUUC-Opr-070360	Ochotona princeps	82.16	0.00e+00	795.00
IUUC-Ont-071277	Oreochromis niloticus	65.16	0.00e+00	1404.00
IUUC-Oan-073623	Ornithorhynchus anatinus	80.34	0.00e+00	1042.00
IUUC-Ocu-074600	Oryctolagus cuniculus	83.37	0.00e+00	1255.00
IUUC-Oba-075024	Oryza barthii	35.59	3.00e-33	136.00
IUUC-Obr-076172	Oryza brachyantha	35.59	2.00e-33	137.00
IUUC-Ogl-077411	Oryza glaberrima	35.59	4.00e-33	136.00
IUUC-Ogu-078025	Oryza glumaepatula	40.22	6.00e-33	136.00
IUUC-Oni-082463	Oryza nivara	35.59	3.00e-33	137.00
IUUC-Opu-084041	Oryza punctata	35.59	1.00e-32	135.00
IUUC-Oru-085075	Oryza rufipogon	40.22	2.00e-32	134.00
IUUC-Osa-085781	Oryza sativa	35.59	5.00e-33	136.00
IUUC-Ola-086729	Oryzias latipes	63.90	0.00e+00	1420.00
IUUC-Olu-087735	Ostreococcus lucimarinus	38.71	2.00e-23	103.00
IUUC-Oga-089113	Otolemur garnettii	81.12	0.00e+00	1866.00
IUUC-Oar-090171	Ovis aries	85.02	0.00e+00	1886.00
IUUC-Ptr-090970	Pan troglodytes	81.71	0.00e+00	1956.00
IUUC-Pan-092778	Papio anubis	80.27	0.00e+00	1377.00
IUUC-Psi-093571	Pelodiscus sinensis	90.67	0.00e+00	2216.00
IUUC-Pma-094563	Petromyzon marinus	75.52	1.00e-106	379.00
IUUC-Ppa-095832	Physcomitrella patens	37.68	1.00e-29	125.00
IUUC-Pfo-097365	Poecilia formosa	62.49	0.00e+00	1306.00
IUUC-Pab-098647	Pongo abelii	80.71	0.00e+00	1052.00
IUUC-Pop-099742	Populus trichocarpa	40.86	4.00e-31	129.00
IUUC-Pca-101035	Procavia capensis	77.15	0.00e+00	989.00
IUUC-Ppe-101783	Prunus persica	39.30	1.00e-30	128.00
IUUC-Pva-103187	Pteropus vampyrus	82.30	0.00e+00	790.00
IUUC-Rno-105701	Rattus norvegicus	81.21	0.00e+00	1901.00
IUUC-Sha-107612	Sarcophilus harrisii	83.95	0.00e+00	1994.00
IUUC-Smo-109107	Selaginella moellendorffii	41.25	1.00e-27	118.00
IUUC-Sit-110786	Setaria italica	39.44	2.00e-32	134.00
IUUC-Sly-110859	Solanum lycopersicum	37.14	3.00e-31	130.00
IUUC-Stu-112031	Solanum tuberosum	37.62	2.00e-31	130.00
IUUC-Sar-113242	Sorex araneus	80.00	0.00e+00	919.00
IUUC-Ssc-116094	Sus scrofa	82.38	0.00e+00	1948.00
IUUC-Tru-118308	Takifugu rubripes	62.32	0.00e+00	1355.00
IUUC-Tsy-119552	Tarsius syrichta	78.52	0.00e+00	1024.00
IUUC-Tca-121616	Theobroma cacao	36.61	1.00e-31	131.00
IUUC-Tae-124768	Triticum aestivum	39.55	6.00e-30	125.00
IUUC-Tur-126480	Triticum urartu	39.55	3.00e-30	126.00
IUUC-Tbe-127902	Tupaia belangeri	79.14	0.00e+00	831.00
IUUC-Ttr-129278	Tursiops truncatus	78.39	0.00e+00	1001.00
IUUC-Vpa-130741	Vicugna pacos	77.61	0.00e+00	747.00
IUUC-Vvi-131437	Vitis vinifera	45.45	3.00e-30	127.00
IUUC-Xtr-132247	Xenopus tropicalis	66.48	0.00e+00	1352.00
IUUC-Xma-134277	Xiphophorus maculatus	63.51	0.00e+00	1419.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence