• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
UUCD2 ID IUUC-Pop-099951
UUCD1 version UUC-PoT-00708
Ensembl Protein ID POPTR_0003s17700.1
UniProt Accession B9GMD9; B9GMD9_POPTR
Genbank Protein ID EEE84078.1; ERP65477.1
Protein Name WD-40 repeat family protein
Genbank Nucleotide ID CM000337; CM000337
Gene Name POPTRDRAFT_750825; POPTR_0001s14560g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0003s17700 POPTR_0003s17700.1 POPTR_0003s17700.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.30e-27 95.7 549 578
UBD/Beta-Prp 7.60e-43 147.9 497 640
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
    Ht +t+++f ++ t l+++s D ++++WD
   Q: 549 HTHIITDVRFrPNsTQLATSSFDSSVRLWD 578
    999********777**************** PP
   


   UBD/Beta-Prp

   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk.ll 172
    +++ v+++++ + +v++++fs +g+ l+s++hd+ + +w++et q ++h+++++ v++ p++ l+++s D+ vrlWd + + l
   Q: 497 NFSEVSSIRKSNGKVVCCHFSTDGKLLASAGHDKKVVLWNMETLQTEC-NPEEHTHIITDVRFRPNSTQLATSSFDSSVRLWDAAGPRyAL 586
    5667899999************************************99.9**********************************7766267 PP
   S: 173 rtltgghtdsvyslsfdsng.kelvsgsldgtvklwdlqtgecvrtlnghtdnvk 226
    +t tg ht+ v sl+f++++ + s+++++ +++w++ + +c r+ +g t++v+
   Q: 587 QTYTG-HTSHVVSLDFHPKKnDVFCSCDDNNEIRFWNINQYSCTRISKGGTTQVR 640
    88898.************9955679************************999986 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
MAQSNWEADK MLDVYIYDYL VKKKLHATAK SFMTEGKVAP DPVAIDAPGG FLFEWWSVFW 60
DIFIARTNEK HSETAAAYLE AQQSKTKEQQ QLQMQHFQLM HHAQLQRGGN NNPTMGGPVN 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099951|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AATTTGATCG GTCAATTTTA TTGATTGAGA ATTTATTTAT TTTAATTTAG GTTATTAGCA 60
GTTTTATTTG GTGATTTTTG AGCTGAAATC ATGGCACAGA GTAATTGGGA AGCAGATAAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099951|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00667--LisH
SM00320--WD40

KEGG pop:POPTR_0001s14560g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000776 Aegilops tauschii 64.47 2.00e-149 522.00
IUUC-Aly-006471 Arabidopsis lyrata 71.79 0.00e+00 1006.00
IUUC-Ath-007671 Arabidopsis thaliana 70.57 0.00e+00 1003.00
IUUC-Bdi-014855 Brachypodium distachyon 62.95 0.00e+00 920.00
IUUC-Bol-016419 Brassica oleracea 70.28 0.00e+00 1032.00
IUUC-Bra-017537 Brassica rapa 68.21 0.00e+00 1003.00
IUUC-Gma-043351 Glycine max 78.10 0.00e+00 1135.00
IUUC-Hvu-047358 Hordeum vulgare 64.89 3.00e-158 550.00
IUUC-Lpe-051527 Leersia perrieri 62.70 0.00e+00 911.00
IUUC-Mtr-058582 Medicago truncatula 75.35 0.00e+00 1062.00
IUUC-Mac-064608 Musa acuminata 63.22 0.00e+00 899.00
IUUC-Ogl-076931 Oryza glaberrima 63.54 0.00e+00 937.00
IUUC-Oin-079144 Oryza indica 63.16 0.00e+00 930.00
IUUC-Olo-080947 Oryza longistaminata 59.11 0.00e+00 844.00
IUUC-Oni-083067 Oryza nivara 63.04 0.00e+00 929.00
IUUC-Opu-083429 Oryza punctata 63.83 0.00e+00 939.00
IUUC-Osa-085788 Oryza sativa 63.29 0.00e+00 934.00
IUUC-Ppe-101896 Prunus persica 76.27 0.00e+00 1044.00
IUUC-Smo-109593 Selaginella moellendorffii 48.39 0.00e+00 667.00
IUUC-Sit-110618 Setaria italica 63.21 0.00e+00 926.00
IUUC-Sbi-114046 Sorghum bicolor 64.81 0.00e+00 949.00
IUUC-Tca-121754 Theobroma cacao 77.54 0.00e+00 1103.00
IUUC-Tae-125446 Triticum aestivum 62.18 0.00e+00 915.00
IUUC-Tur-126636 Triticum urartu 60.32 0.00e+00 812.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved