iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sit-110244

Ensembl Protein ID

Si034443m

UniProt Accession

K4A6D9; K4A6D9_SETIT

Genbank Protein ID

KQK86068.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM003536

Gene Name

LOC101784687; SETIT_034443mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Si034443m.g	Si034443m	Si034443m
Si034443m.g	Si034921m	Si034921m

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.70e-28	97.3	610	647
UBD/Beta-Prp	3.80e-44	152.0	575	721

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+++v+c+++  s+ +l+s s D t+kvW++++g +++
   Q: 610  GHNSEVNCVCWdeSGEYLASVSQD-TVKVWSVSSGACIH 647
           8**********9777*********.**********9987 PP

UBD/Beta-Prp

   S: 16   vkf.spdksllatgsrdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGs 113
           v f  ++++lla+++  +++ ++dv+++  l s  +gh++ev++v+++++g++l+++s+D t+kvw++s+g c+h l+ h ++  s+ f+p   k+++ +
   Q: 575  VRFqPRSGQLLAVAG-GSMVNIFDVEKQANLPSPaKGHNSEVNCVCWDESGEYLASVSQD-TVKVWSVSSGACIHQLRSHGNQYQSCVFHPRYPKVLIVG 672
           567334555666655.99999999999999888779999999999999999999999999.899999999999999999999999999999665555555 PP
   S: 114  hdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlW 164
             +t+++w l+ +q    + + h+g+v  ++ +p++ +++s+s Dr v+lW
   Q: 673  GYQTLELWSLSDNQRN--PIQAHEGLVAALAHSPFTGMIASASHDRYVKLW 721
           5999999999999998..589999999999999999999999999999999 PP

Organism

Setaria italica

Protein Sequence
(Fasta)

MARTNWEADK MLDVYIYDYL VKRNLQATAK AFIAEGKVAT DPVAIDAPGG FLFEWWSIFW 60
DIFHSSTAKP ASSSASGPPL HDINKSREHQ MRLQLLHQHN AAQLHTRGPD VSAVLASKMM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTAAAGCTTT CTAGCGATTC CTGGCGTTCC TCTTCCGATT CGCCTCCTCC GTTTGCGGCG 60
GATAGGATTT GGATTTTCGG ATCGACCGAC GAATCCATCC ATGGCGCGGA CCAACTGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006594--LisH
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08513--LisH
PF00400--WD40

SMART

SM00667--LisH
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000895	Aegilops tauschii	68.85	0.00e+00	954.00
IUUC-Bdi-014357	Brachypodium distachyon	73.87	0.00e+00	1024.00
IUUC-Oba-075852	Oryza barthii	69.77	0.00e+00	907.00
IUUC-Obr-076065	Oryza brachyantha	73.85	0.00e+00	965.00
IUUC-Ogl-077588	Oryza glaberrima	76.54	0.00e+00	1021.00
IUUC-Ogu-078076	Oryza glumaepatula	70.32	0.00e+00	936.00
IUUC-Oin-079375	Oryza indica	72.95	0.00e+00	1011.00
IUUC-Ome-081919	Oryza meridionalis	69.25	0.00e+00	929.00
IUUC-Oni-082308	Oryza nivara	70.91	0.00e+00	952.00
IUUC-Opu-083437	Oryza punctata	73.36	0.00e+00	1011.00
IUUC-Oru-085080	Oryza rufipogon	70.50	0.00e+00	936.00
IUUC-Osa-085544	Oryza sativa	76.54	0.00e+00	1021.00
IUUC-Sbi-114483	Sorghum bicolor	81.59	0.00e+00	1097.00
IUUC-Tae-125279	Triticum aestivum	69.47	0.00e+00	969.00
IUUC-Tur-125961	Triticum urartu	67.88	0.00e+00	929.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence