iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-126850

Ensembl Protein ID

TRIUR3_17025-P1

UniProt Accession

M8A6M4; M8A6M4_TRIUA

Genbank Protein ID

EMS68082.1

Protein Name

WD-40 repeat-containing protein MSI1

Genbank Nucleotide ID

KD011172

Gene Name

TRIUR3_17025

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_17025	TRIUR3_17025-T1	TRIUR3_17025-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.30e-30	103.5	297	330

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrt 32
           H+++v+claf   +++ +++Gs D+t+k++Dlr+
   Q: 297  HQGEVNCLAFnpfNEWVVATGSTDKTVKLFDLRK 330
           9**********977799**************986 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MVLGTHTSDN EPNYLMLAQV QLPLDDAEAD ARHYDDDHAD IVSCVVIERV LVVYWRGNTI 60
SHVSDRKCSY KSFALSFFVH FHYITFEALT LSVIGLVLGD VNAKQHFLHR LILSRNHCIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGCTCG GGACCCACAC CTCCGACAAC GAGCCCAACT ACCTCATGCT CGCCCAGGTC 60
CAGCTCCCCC TCGACGACGC CGAGGCCGAC GCGCGCCACT ACGACGACGA CCACGCCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0009507--C:chloroplast
GO:0005677--C:chromatin silencing complex
GO:0043234--C:protein complex
GO:0008283--P:cell proliferation
GO:0009793--P:embryo development ending in seed dormancy
GO:0031507--P:heterochromatin assembly
GO:0048366--P:leaf development
GO:0009555--P:pollen development
GO:0045787--P:positive regulation of cell cycle
GO:0009909--P:regulation of flower development
GO:0006349--P:regulation of gene expression by genetic imprinting
GO:2000653--P:regulation of genetic imprinting
GO:0010214--P:seed coat development
GO:0010026--P:trichome differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000757	Aegilops tauschii	95.37	0.00e+00	642.00
IUUC-Aml-001256	Ailuropoda melanoleuca	63.38	9.00e-115	405.00
IUUC-Atr-003075	Amborella trichopoda	82.41	4.00e-165	573.00
IUUC-Apl-003952	Anas platyrhynchos	63.55	2.00e-117	414.00
IUUC-Aca-004508	Anolis carolinensis	64.33	3.00e-117	414.00
IUUC-Aly-006342	Arabidopsis lyrata	83.74	1.00e-164	571.00
IUUC-Ath-006855	Arabidopsis thaliana	84.26	2.00e-166	577.00
IUUC-Ago-007892	Ashbya gossypii	35.10	7.00e-49	187.00
IUUC-Acl-008163	Aspergillus clavatus	47.53	1.00e-81	296.00
IUUC-Afl-008645	Aspergillus flavus	47.53	1.00e-80	292.00
IUUC-Afu-009091	Aspergillus fumigatus	47.53	2.00e-81	295.00
IUUC-Ani-009478	Aspergillus nidulans	43.52	4.00e-66	244.00
IUUC-Ang-009707	Aspergillus niger	47.38	2.00e-80	291.00
IUUC-Aor-010028	Aspergillus oryzae	47.53	1.00e-80	292.00
IUUC-Ate-010416	Aspergillus terreus	47.38	4.00e-84	303.00
IUUC-Ame-010598	Astyanax mexicanus	62.74	3.00e-114	404.00
IUUC-Bgr-012001	Blumeria graminis	42.72	7.00e-60	223.00
IUUC-Bta-012851	Bos taurus	63.55	2.00e-117	414.00
IUUC-Bci-013815	Botrytis cinerea	43.93	5.00e-75	273.00
IUUC-Bdi-014926	Brachypodium distachyon	94.14	0.00e+00	634.00
IUUC-Bol-015856	Brassica oleracea	82.04	2.00e-162	565.00
IUUC-Bra-016725	Brassica rapa	73.93	4.00e-149	520.00
IUUC-Cel-018587	Caenorhabditis elegans	59.06	3.00e-104	370.00
IUUC-Cja-019884	Callithrix jacchus	63.55	2.00e-117	414.00
IUUC-Cfa-020343	Canis familiaris	63.55	2.00e-117	414.00
IUUC-Cpo-021591	Cavia porcellus	63.55	2.00e-117	414.00
IUUC-Cre-022563	Chlamydomonas reinhardtii	64.87	1.00e-119	422.00
IUUC-Csa-023738	Chlorocebus sabaeus	63.38	4.00e-115	407.00
IUUC-Cho-024506	Choloepus hoffmanni	63.24	7.00e-116	409.00
IUUC-Cin-025589	Ciona intestinalis	61.78	1.00e-112	399.00
IUUC-Csv-026216	Ciona savignyi	54.21	3.00e-112	397.00
IUUC-Cgl-026564	Colletotrichum gloeosporioides	44.14	4.00e-73	267.00
IUUC-Cne-026792	Cryptococcus neoformans	49.68	1.00e-91	328.00
IUUC-Cme-027307	Cyanidioschyzon merolae	50.16	1.00e-93	335.00
IUUC-Dre-028269	Danio rerio	61.99	2.00e-114	404.00
IUUC-Dno-028971	Dasypus novemcinctus	63.55	2.00e-117	414.00
IUUC-Dor-030733	Dipodomys ordii	67.92	5.00e-63	234.00
IUUC-Dse-031282	Dothistroma septosporum	42.99	6.00e-73	267.00
IUUC-Dme-032126	Drosophila melanogaster	61.06	7.00e-115	406.00
IUUC-Ete-032731	Echinops telfairi	63.55	2.00e-117	414.00
IUUC-Eca-034138	Equus caballus	63.38	9.00e-115	405.00
IUUC-Eeu-034644	Erinaceus europaeus	58.99	3.00e-53	201.00
IUUC-Fca-036202	Felis catus	63.55	2.00e-117	414.00
IUUC-Fal-037084	Ficedula albicollis	63.55	2.00e-117	414.00
IUUC-Fox-037974	Fusarium oxysporum	44.62	9.00e-76	276.00
IUUC-Fso-038246	Fusarium solani	45.37	4.00e-76	277.00
IUUC-Gmo-039214	Gadus morhua	62.11	3.00e-114	404.00
IUUC-Ggr-039741	Gaeumannomyces graminis	45.34	3.00e-76	277.00
IUUC-Gga-040764	Gallus gallus	64.01	3.00e-117	414.00
IUUC-Gac-042627	Gasterosteus aculeatus	61.80	5.00e-114	403.00
IUUC-Gma-042791	Glycine max	84.26	7.00e-166	575.00
IUUC-Ggo-045422	Gorilla gorilla	58.33	1.00e-98	352.00
IUUC-Hsa-045683	Homo sapiens	63.55	2.00e-117	414.00
IUUC-Hvu-047457	Hordeum vulgare	99.50	2.00e-119	420.00
IUUC-Itr-047950	Ictidomys tridecemlineatus	63.55	2.00e-117	414.00
IUUC-Kpa-049119	Komagataella pastoris	37.86	2.00e-55	208.00
IUUC-Lch-050545	Latimeria chalumnae	63.24	8.00e-117	412.00
IUUC-Lpe-051337	Leersia perrieri	91.64	2.00e-178	617.00
IUUC-Loc-052473	Lepisosteus oculatus	63.06	9.00e-116	409.00
IUUC-Lma-053275	Leptosphaeria maculans	39.59	3.00e-35	140.00
IUUC-Laf-054114	Loxodonta africana	63.55	2.00e-117	414.00
IUUC-Mcc-055648	Macaca mulatta	63.55	2.00e-117	414.00
IUUC-Meu-056490	Macropus eugenii	63.55	2.00e-117	414.00
IUUC-Mor-056947	Magnaporthe oryzae	45.06	7.00e-74	270.00
IUUC-Mpo-057602	Magnaporthe poae	45.68	5.00e-76	277.00
IUUC-Mtr-057853	Medicago truncatula	83.86	5.00e-164	569.00
IUUC-Mla-058884	Melampsora laricipopulina	50.00	6.00e-89	320.00
IUUC-Mga-059452	Meleagris gallopavo	63.55	2.00e-117	414.00
IUUC-Mvi-060450	Microbotryum violaceum	53.16	7.00e-88	316.00
IUUC-Mmr-061008	Microcebus murinus	63.38	4.00e-115	407.00
IUUC-Mdo-062817	Monodelphis domestica	63.69	6.00e-116	409.00
IUUC-Mmu-063282	Mus musculus	63.55	2.00e-117	414.00
IUUC-Mac-065480	Musa acuminata	85.19	5.00e-166	576.00
IUUC-Mpu-066529	Mustela putorius furo	63.24	7.00e-117	412.00
IUUC-Mlu-068072	Myotis lucifugus	63.55	2.00e-117	414.00
IUUC-Nfi-068374	Neosartorya fischeri	47.53	5.00e-79	287.00
IUUC-Ncr-068794	Neurospora crassa	42.55	7.00e-70	256.00
IUUC-Nle-069577	Nomascus leucogenys	63.55	2.00e-117	414.00
IUUC-Opr-070245	Ochotona princeps	55.56	1.00e-81	296.00
IUUC-Ont-072590	Oreochromis niloticus	62.11	1.00e-114	405.00
IUUC-Oan-072839	Ornithorhynchus anatinus	53.98	6.00e-118	416.00
IUUC-Ocu-073968	Oryctolagus cuniculus	63.55	2.00e-117	414.00
IUUC-Oba-075719	Oryza barthii	91.33	1.00e-180	625.00
IUUC-Obr-076859	Oryza brachyantha	92.26	3.00e-180	623.00
IUUC-Ogl-077920	Oryza glaberrima	91.33	2.00e-178	617.00
IUUC-Ogu-078048	Oryza glumaepatula	91.33	6.00e-180	622.00
IUUC-Oin-079960	Oryza indica	85.51	5.00e-177	612.00
IUUC-Olo-080553	Oryza longistaminata	85.92	1.00e-175	608.00
IUUC-Ome-081835	Oryza meridionalis	91.33	2.00e-179	621.00
IUUC-Oni-082494	Oryza nivara	91.33	6.00e-180	622.00
IUUC-Opu-083913	Oryza punctata	86.69	6.00e-165	572.00
IUUC-Oru-084666	Oryza rufipogon	91.33	2.00e-178	617.00
IUUC-Osa-085884	Oryza sativa	91.33	2.00e-178	617.00
IUUC-Ola-086664	Oryzias latipes	62.74	2.00e-114	404.00
IUUC-Olu-087579	Ostreococcus lucimarinus	66.67	4.00e-121	427.00
IUUC-Oga-088364	Otolemur garnettii	63.55	2.00e-117	414.00
IUUC-Oar-089652	Ovis aries	63.55	2.00e-117	414.00
IUUC-Ptr-091598	Pan troglodytes	63.38	4.00e-115	407.00
IUUC-Pan-092412	Papio anubis	63.38	4.00e-115	407.00
IUUC-Psi-093300	Pelodiscus sinensis	63.55	2.00e-117	414.00
IUUC-Pma-094307	Petromyzon marinus	60.57	3.00e-114	404.00
IUUC-Pno-095153	Phaeosphaeria nodorum	43.09	1.00e-70	259.00
IUUC-Ppa-095800	Physcomitrella patens	63.73	6.00e-140	489.00
IUUC-Pfo-097240	Poecilia formosa	61.80	7.00e-114	402.00
IUUC-Pab-097697	Pongo abelii	63.55	2.00e-117	414.00
IUUC-Pop-099709	Populus trichocarpa	84.26	3.00e-166	577.00
IUUC-Pca-100250	Procavia capensis	61.22	9.00e-90	323.00
IUUC-Ppe-101212	Prunus persica	86.34	4.00e-168	583.00
IUUC-Pva-102253	Pteropus vampyrus	63.55	2.00e-117	414.00
IUUC-Pgr-103441	Puccinia graminis	47.10	6.00e-83	300.00
IUUC-Ptt-103891	Puccinia triticina	25.71	7.00e-18	83.60
IUUC-Pte-104332	Pyrenophora teres	43.18	8.00e-70	256.00
IUUC-Pyt-104516	Pyrenophora triticirepentis	43.18	6.00e-70	256.00
IUUC-Rno-105678	Rattus norvegicus	63.55	2.00e-117	414.00
IUUC-Sce-106364	Saccharomyces cerevisiae	34.84	2.00e-44	172.00
IUUC-Sha-106663	Sarcophilus harrisii	63.55	2.00e-117	414.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	46.62	1.00e-77	282.00
IUUC-Spo-108145	Schizosaccharomyces pombe	45.45	1.00e-73	269.00
IUUC-Smo-109159	Selaginella moellendorffii	74.06	3.00e-142	496.00
IUUC-Sit-110144	Setaria italica	91.69	3.00e-178	616.00
IUUC-Sly-111680	Solanum lycopersicum	84.21	1.00e-165	575.00
IUUC-Stu-111931	Solanum tuberosum	85.48	2.00e-161	561.00
IUUC-Sar-113236	Sorex araneus	55.73	3.00e-92	331.00
IUUC-Sbi-114637	Sorghum bicolor	91.38	3.00e-177	613.00
IUUC-Sre-114980	Sporisorium reilianum	50.49	7.00e-92	330.00
IUUC-Ssc-115711	Sus scrofa	63.55	2.00e-117	414.00
IUUC-Tgu-116925	Taeniopygia guttata	63.24	5.00e-117	413.00
IUUC-Tru-117549	Takifugu rubripes	62.54	3.00e-113	400.00
IUUC-Tsy-118854	Tarsius syrichta	63.38	8.00e-115	406.00
IUUC-Tni-120398	Tetraodon nigroviridis	62.66	4.00e-114	403.00
IUUC-Tca-121841	Theobroma cacao	78.79	1.00e-167	581.00
IUUC-Tre-122190	Trichoderma reesei	46.27	3.00e-69	254.00
IUUC-Tvi-122304	Trichoderma virens	46.60	2.00e-78	285.00
IUUC-Tae-124648	Triticum aestivum	95.37	0.00e+00	639.00
IUUC-Tme-126949	Tuber melanosporum	47.50	6.00e-78	283.00
IUUC-Tbe-127459	Tupaia belangeri	58.69	4.00e-99	353.00
IUUC-Ttr-128558	Tursiops truncatus	63.69	2.00e-115	407.00
IUUC-Uma-129424	Ustilago maydis	50.81	1.00e-93	335.00
IUUC-Vda-129873	Verticillium dahliae	42.64	1.00e-72	266.00
IUUC-Vpa-130079	Vicugna pacos	63.24	7.00e-117	412.00
IUUC-Vvi-131585	Vitis vinifera	78.79	1.00e-169	587.00
IUUC-Xtr-132005	Xenopus tropicalis	63.24	1.00e-116	411.00
IUUC-Xma-133066	Xiphophorus maculatus	62.74	2.00e-114	404.00
IUUC-Yli-134334	Yarrowia lipolytica	39.81	3.00e-63	234.00
IUUC-Zma-135873	Zea mays	91.38	2.00e-178	617.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence