iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ ++  ++++G+ D+t+++WD+r
   Q: 332  GHLDYSFASAWhPNgVTFATGNQDKTCRIWDTR 364
           799999999***777999*************87 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MVVNYYIAGF WKLTYCWRWR DMADFDEYMA DEYDMDDLED DMNAAFDGRD IDASDSEVED 60
FDQLNKAADT SAAQARNGKD IQGIPWDSLT LTRKDYRKTR LEQYKNYENI PNSGDESAKK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTATTCGAT TTTATTTATG TAATTCTCAT GTTATTTATC TTTTCTGTTG AAACCTCTCT 60
TTCTCGAAAC TACTAATATT AGGGTTTTCT GGGTTTGAGA CCACGATCTT ATCGAATTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001117	Aegilops tauschii	70.36	0.00e+00	634.00
IUUC-Atr-003022	Amborella trichopoda	73.56	0.00e+00	648.00
IUUC-Aly-006558	Arabidopsis lyrata	96.65	0.00e+00	804.00
IUUC-Bdi-014834	Brachypodium distachyon	70.60	0.00e+00	639.00
IUUC-Bol-016279	Brassica oleracea	87.87	0.00e+00	810.00
IUUC-Bra-016810	Brassica rapa	92.86	0.00e+00	823.00
IUUC-Dse-031456	Dothistroma septosporum	31.17	6.00e-41	160.00
IUUC-Gma-043334	Glycine max	75.00	0.00e+00	656.00
IUUC-Hvu-047631	Hordeum vulgare	61.09	2.00e-161	561.00
IUUC-Lpe-050907	Leersia perrieri	66.43	2.00e-167	581.00
IUUC-Mtr-058694	Medicago truncatula	69.63	0.00e+00	642.00
IUUC-Mac-065126	Musa acuminata	70.68	0.00e+00	643.00
IUUC-Oba-075716	Oryza barthii	69.81	0.00e+00	629.00
IUUC-Obr-076195	Oryza brachyantha	63.99	9.00e-165	572.00
IUUC-Ogl-077272	Oryza glaberrima	69.14	1.00e-180	625.00
IUUC-Ogu-078041	Oryza glumaepatula	69.57	0.00e+00	628.00
IUUC-Oin-079991	Oryza indica	63.17	1.00e-164	572.00
IUUC-Olo-080659	Oryza longistaminata	58.12	1.00e-140	491.00
IUUC-Ome-081872	Oryza meridionalis	60.96	4.00e-155	540.00
IUUC-Oni-082371	Oryza nivara	69.57	0.00e+00	628.00
IUUC-Opu-083680	Oryza punctata	62.50	2.00e-165	574.00
IUUC-Oru-085156	Oryza rufipogon	69.57	0.00e+00	629.00
IUUC-Osa-086197	Oryza sativa	69.57	0.00e+00	629.00
IUUC-Pop-099666	Populus trichocarpa	69.39	0.00e+00	643.00
IUUC-Pte-104305	Pyrenophora teres	29.05	1.00e-45	177.00
IUUC-Pyt-104723	Pyrenophora triticirepentis	29.46	5.00e-46	178.00
IUUC-Sja-107761	Schizosaccharomyces japonicus	33.78	4.00e-51	194.00
IUUC-Spo-108140	Schizosaccharomyces pombe	30.48	3.00e-37	148.00
IUUC-Sit-110589	Setaria italica	65.14	3.00e-170	590.00
IUUC-Sly-111343	Solanum lycopersicum	72.08	0.00e+00	674.00
IUUC-Stu-112207	Solanum tuberosum	74.62	0.00e+00	658.00
IUUC-Sbi-113791	Sorghum bicolor	70.60	0.00e+00	637.00
IUUC-Tca-121187	Theobroma cacao	76.08	0.00e+00	687.00
IUUC-Tae-122709	Triticum aestivum	67.58	5.00e-169	586.00
IUUC-Tur-126622	Triticum urartu	63.70	3.00e-177	614.00
IUUC-Vvi-131183	Vitis vinifera	73.23	0.00e+00	686.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence