iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-005640

Ensembl Protein ID

fgenesh1_pm.C_scaffold_1000187

UniProt Accession

D7KCB0; D7KCB0_ARALL

Genbank Protein ID

EFH68405.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

GL348713

Gene Name

SPI; ARALYDRAFT_311407

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_1000187	fgenesh1_pm.C_scaffold_1000187	fgenesh1_pm.C_scaffold_1000187

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-09	36.5	3384	3417

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           Ht++vtcl+   +  +++sGsdD+t+ +WDl++ 
   Q: 3384 HTAKVTCLRVsqPYMMIASGSDDCTVIIWDLSSL 3417
           **********855588**************9765 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MKWATLLKDI KEKVGLAQSS DAATSDPFSV DLTAPPSSSS SPSFTYASSS SLHHFNLSPS 60
SRDNHELELD FKRLWEEFRS SSSEKEKEAA LNLTVDIFCR LVKRHANVDQ LVTMLVETHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAATGGG CAACATTGCT TAAGGACATC AAGGAGAAGG TTGGATTAGC TCAATCCTCT 60
GACGCCGCTA CCTCCGACCC CTTTTCCGTT GACCTAACTG CTCCGCCGTC CTCTTCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0071472--P:cellular response to salt stress
GO:0033962--P:cytoplasmic mRNA processing body assembly
GO:0009825--P:multidimensional cell growth
GO:1904580--P:regulation of intracellular mRNA localization
GO:0009737--P:response to abscisic acid
GO:0010090--P:trichome morphogenesis
GO:0007033--P:vacuole organization

KEGG

aly:ARALYDRAFT_311407

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000317	Aegilops tauschii	64.21	0.00e+00	4429.00
IUUC-Atr-002879	Amborella trichopoda	67.35	0.00e+00	4650.00
IUUC-Ath-007645	Arabidopsis thaliana	97.34	0.00e+00	6893.00
IUUC-Bdi-015031	Brachypodium distachyon	64.83	0.00e+00	4460.00
IUUC-Bol-016148	Brassica oleracea	92.35	0.00e+00	6500.00
IUUC-Bra-017449	Brassica rapa	92.04	0.00e+00	6447.00
IUUC-Cin-025176	Ciona intestinalis	26.07	4.00e-15	75.10
IUUC-Cgl-026670	Colletotrichum gloeosporioides	38.81	1.00e-119	425.00
IUUC-Dno-028965	Dasypus novemcinctus	39.51	3.00e-134	474.00
IUUC-Dor-031065	Dipodomys ordii	33.20	6.00e-106	380.00
IUUC-Gmo-039503	Gadus morhua	43.09	2.00e-169	590.00
IUUC-Gga-041220	Gallus gallus	39.89	2.00e-140	494.00
IUUC-Gac-041618	Gasterosteus aculeatus	37.48	1.00e-172	602.00
IUUC-Gma-042724	Glycine max	73.90	0.00e+00	5180.00
IUUC-Hvu-047814	Hordeum vulgare	65.14	0.00e+00	4516.00
IUUC-Lch-049803	Latimeria chalumnae	39.88	5.00e-129	455.00
IUUC-Lpe-050828	Leersia perrieri	65.12	0.00e+00	4467.00
IUUC-Loc-052434	Lepisosteus oculatus	32.12	1.00e-169	591.00
IUUC-Mtr-058732	Medicago truncatula	73.21	0.00e+00	5130.00
IUUC-Mac-064872	Musa acuminata	58.91	0.00e+00	2354.00
IUUC-Oan-073118	Ornithorhynchus anatinus	29.34	4.00e-131	463.00
IUUC-Oba-075831	Oryza barthii	65.69	0.00e+00	4521.00
IUUC-Obr-076728	Oryza brachyantha	65.70	0.00e+00	4524.00
IUUC-Ogl-077922	Oryza glaberrima	65.21	0.00e+00	4472.00
IUUC-Ogu-079001	Oryza glumaepatula	65.24	0.00e+00	4477.00
IUUC-Oin-079929	Oryza indica	76.01	0.00e+00	984.00
IUUC-Olo-080662	Oryza longistaminata	65.08	0.00e+00	4465.00
IUUC-Ome-081733	Oryza meridionalis	65.93	0.00e+00	4360.00
IUUC-Oni-082641	Oryza nivara	65.21	0.00e+00	4473.00
IUUC-Opu-083564	Oryza punctata	65.11	0.00e+00	4476.00
IUUC-Oru-084403	Oryza rufipogon	65.21	0.00e+00	4474.00
IUUC-Osa-085957	Oryza sativa	65.01	6.00e-146	509.00
IUUC-Ppa-095447	Physcomitrella patens	49.43	0.00e+00	3102.00
IUUC-Pfo-097102	Poecilia formosa	37.00	3.00e-173	603.00
IUUC-Pop-099807	Populus trichocarpa	75.70	0.00e+00	5142.00
IUUC-Ppe-101277	Prunus persica	75.70	0.00e+00	5227.00
IUUC-Ptt-103873	Puccinia triticina	36.14	6.00e-105	376.00
IUUC-Spo-108108	Schizosaccharomyces pombe	33.84	5.00e-127	449.00
IUUC-Smo-109485	Selaginella moellendorffii	48.83	0.00e+00	3051.00
IUUC-Sit-110811	Setaria italica	65.23	0.00e+00	4209.00
IUUC-Sly-110936	Solanum lycopersicum	72.34	0.00e+00	4972.00
IUUC-Sbi-114421	Sorghum bicolor	63.78	0.00e+00	4358.00
IUUC-Tca-121423	Theobroma cacao	76.97	0.00e+00	5400.00
IUUC-Tvi-122476	Trichoderma virens	36.19	4.00e-131	463.00
IUUC-Tur-126221	Triticum urartu	64.24	0.00e+00	4358.00
IUUC-Tme-126944	Tuber melanosporum	37.60	1.00e-136	481.00
IUUC-Vda-129813	Verticillium dahliae	37.94	3.00e-130	460.00
IUUC-Xma-133750	Xiphophorus maculatus	41.67	1.00e-135	478.00
IUUC-Zma-135580	Zea mays	64.45	0.00e+00	4432.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence