iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014749

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

BRADI_1g62970

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G62970	BRADI1G62970.1	BRADI1G62970.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-08	34.3	114	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f    + g +v +CgH fha+C+++w       + + +CPlCr
   Q: 114  CAVCLVEFghggEAGRFVPGCGHGFHASCIEAW------FRVRPTCPLCR 157
           ********666544455566*************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDDGAGGGIA PFPSPLPVAG GGHGHVKSRA SSAVAAASVA LILLYLFWKF LWQCRKDVAP 60
RRDDNAASSS SSAQRPIDPE RGENKVRMPV PASPVRVDGP SESDSGDAAE KAECAVCLVE 120

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Nucleotide Sequence
(Fasta)

ATGGACGACG GTGCGGGCGG TGGCATCGCT CCTTTCCCCT CGCCGTTGCC GGTCGCGGGC 60
GGTGGCCATG GGCACGTCAA GAGCCGGGCC TCGTCGGCGG TCGCGGCGGC CAGCGTCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:104582369

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047248	Hordeum vulgare	41.32	1.00e-15	75.50
IUUC-Sit-110323	Setaria italica	40.00	2.00e-18	84.30
IUUC-Sbi-114671	Sorghum bicolor	43.80	1.00e-19	88.60
IUUC-Tae-124975	Triticum aestivum	70.59	5.00e-16	76.30
IUUC-Tur-126790	Triticum urartu	49.61	4.00e-23	100.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence