iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113914

UUCD1 version

UUC-SoB-00623

Ensembl Protein ID

Sb03g003920.1

UniProt Accession

A0A1B6Q198; A0A1B6Q198_SORBI

Genbank Protein ID

KXG31704.1; KXG31705.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762; CM000762

Gene Name

SORBI_003G044700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g003920	Sb03g003920.1	Sb03g003920.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.40e-08	34.0	335	376

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+ f   +d ++ lpC Hvfh +C+ kw       + +++CPlC+
   Q: 335  CCICLSKFsnnED-LRELPCAHVFHMECIDKW------LQINALCPLCK 376
           ********88666.******************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAQTGNLSQR DHTIDIPMSD GTSPSTSHQD DPSGLDELHH SRGPSNEVPP GPERSSGTND 60
ASDSHNASSA RIDRGHRQQN PLNSGFWISI ELIVNLSQIV AAIAVLSVSR NEHPHAPLFT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTCAGA CTGGAAACTT GAGCCAACGC GATCACACAA TTGACATACC AATGAGTGAT 60
GGTACCTCCC CATCAACATC TCACCAGGAT GATCCCAGTG GCTTGGATGA GTTGCATCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000534	Aegilops tauschii	65.69	1.00e-144	504.00
IUUC-Ame-011948	Astyanax mexicanus	33.02	3.00e-15	75.10
IUUC-Bdi-014235	Brachypodium distachyon	66.75	5.00e-152	529.00
IUUC-Cme-027312	Cyanidioschyzon merolae	28.35	6.00e-21	94.00
IUUC-Dre-028365	Danio rerio	34.86	3.00e-15	75.10
IUUC-Dno-029617	Dasypus novemcinctus	32.74	1.00e-13	70.90
IUUC-Hvu-047833	Hordeum vulgare	71.29	1.00e-161	561.00
IUUC-Lpe-050720	Leersia perrieri	73.95	7.00e-158	549.00
IUUC-Oba-075466	Oryza barthii	74.55	8.00e-168	582.00
IUUC-Obr-076276	Oryza brachyantha	74.93	5.00e-164	569.00
IUUC-Ogl-076994	Oryza glaberrima	74.55	8.00e-168	582.00
IUUC-Ogu-078200	Oryza glumaepatula	74.55	8.00e-168	582.00
IUUC-Oin-079508	Oryza indica	74.55	8.00e-168	582.00
IUUC-Olo-080855	Oryza longistaminata	74.29	7.00e-167	579.00
IUUC-Ome-081841	Oryza meridionalis	74.81	1.00e-168	585.00
IUUC-Oni-082470	Oryza nivara	74.29	4.00e-167	579.00
IUUC-Opu-083790	Oryza punctata	73.28	3.00e-170	590.00
IUUC-Oru-085181	Oryza rufipogon	74.55	9.00e-168	582.00
IUUC-Osa-086143	Oryza sativa	74.55	2.00e-167	580.00
IUUC-Sit-110501	Setaria italica	83.58	0.00e+00	647.00
IUUC-Tae-122858	Triticum aestivum	71.29	4.00e-157	546.00
IUUC-Tur-126765	Triticum urartu	66.18	1.00e-139	488.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence